RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 H3BS24 57 aa5.67□□□□□ -1.5
POLR2J3-208ENST00000504101 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
POLR2J3-208ENST00000504101 A0A1B0GU33 70 aa5.63□□□□□ -1.51
POLR2J3-208ENST00000504101 A0A1B0GV90 55 aa5.62□□□□□ -1.51
POLR2J3-208ENST00000504101 COA5Q86WW8 74 aa5.61□□□□□ -1.51
POLR2J3-208ENST00000504101 KRTAP5-5Q701N2 237 aaPredicted RBP5.59□□□□□ -1.51
POLR2J3-208ENST00000504101 TNP1P09430 55 aa5.58□□□□□ -1.52
POLR2J3-208ENST00000504101 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
POLR2J3-208ENST00000504101 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
POLR2J3-208ENST00000504101 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
POLR2J3-208ENST00000504101 SMIM26A0A096LP01 95 aa5.48□□□□□ -1.53
POLR2J3-208ENST00000504101 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
POLR2J3-208ENST00000504101 A8MU10 97 aa5.45□□□□□ -1.54
POLR2J3-208ENST00000504101 SERP2Q8N6R1 65 aa5.41□□□□□ -1.54
POLR2J3-208ENST00000504101 A0A1B0GU69 56 aa5.33□□□□□ -1.56
POLR2J3-208ENST00000504101 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
POLR2J3-208ENST00000504101 K7ERU9 68 aa5.28□□□□□ -1.56
POLR2J3-208ENST00000504101 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
POLR2J3-208ENST00000504101 AHNAKQ09666 5890 aaKnown RBP5.25□□□□□ -1.57
POLR2J3-208ENST00000504101 MUC5ACP98088 5654 aa5.22□□□□□ -1.57
POLR2J3-208ENST00000504101 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
POLR2J3-208ENST00000504101 MUC5BQ9HC84 5762 aaPredicted RBP5.18□□□□□ -1.58
POLR2J3-208ENST00000504101 KRTAP5-8O75690 187 aa5.16□□□□□ -1.58
POLR2J3-208ENST00000504101 H7BZZ5 65 aa5.14□□□□□ -1.59
POLR2J3-208ENST00000504101 COX7CP15954 63 aa5.09□□□□□ -1.59
POLR2J3-208ENST00000504101 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
POLR2J3-208ENST00000504101 MT1AP04731 61 aa5.06□□□□□ -1.6
POLR2J3-208ENST00000504101 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
POLR2J3-208ENST00000504101 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
POLR2J3-208ENST00000504101 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
POLR2J3-208ENST00000504101 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
POLR2J3-208ENST00000504101 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
POLR2J3-208ENST00000504101 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
POLR2J3-208ENST00000504101 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
POLR2J3-208ENST00000504101 UQCR11O14957 56 aa4.85□□□□□ -1.63
POLR2J3-208ENST00000504101 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
POLR2J3-208ENST00000504101 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
POLR2J3-208ENST00000504101 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
POLR2J3-208ENST00000504101 K7ERS5 55 aa4.71□□□□□ -1.66
POLR2J3-208ENST00000504101 MIR22HGQ0VDD5 57 aa4.7□□□□□ -1.66
POLR2J3-208ENST00000504101 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
POLR2J3-208ENST00000504101 MT3P25713 68 aa4.65□□□□□ -1.67
POLR2J3-208ENST00000504101 ANAPC13Q9BS18 74 aa4.65□□□□□ -1.67
POLR2J3-208ENST00000504101 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
POLR2J3-208ENST00000504101 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
POLR2J3-208ENST00000504101 CDC42SE1Q9NRR8 79 aa4.4□□□□□ -1.71
POLR2J3-208ENST00000504101 TMEM258P61165 79 aa4.37□□□□□ -1.71
POLR2J3-208ENST00000504101 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
POLR2J3-208ENST00000504101 PSPHP1O15172 72 aa4.35□□□□□ -1.71
POLR2J3-208ENST00000504101 Q1T7F1 81 aa4.34□□□□□ -1.71
POLR2J3-208ENST00000504101 ROMO1P60602 79 aa4.28□□□□□ -1.72
POLR2J3-208ENST00000504101 V9GYY9 64 aa4.25□□□□□ -1.73
POLR2J3-208ENST00000504101 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
POLR2J3-208ENST00000504101 A6NED7 52 aa4.17□□□□□ -1.74
POLR2J3-208ENST00000504101 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
POLR2J3-208ENST00000504101 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
POLR2J3-208ENST00000504101 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
POLR2J3-208ENST00000504101 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
POLR2J3-208ENST00000504101 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
POLR2J3-208ENST00000504101 PHGR1C9JFL3 82 aa3.6□□□□□ -1.83
POLR2J3-208ENST00000504101 PCP4P48539 62 aa3.52□□□□□ -1.85
POLR2J3-208ENST00000504101 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
POLR2J3-208ENST00000504101 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
POLR2J3-208ENST00000504101 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
POLR2J3-208ENST00000504101 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
POLR2J3-208ENST00000504101 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
POLR2J3-208ENST00000504101 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
POLR2J3-208ENST00000504101 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
POLR2J3-208ENST00000504101 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
POLR2J3-208ENST00000504101 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
POLR2J3-208ENST00000504101 PMAIP1Q13794 54 aa2.76□□□□□ -1.97
POLR2J3-208ENST00000504101 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
POLR2J3-208ENST00000504101 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
POLR2J3-208ENST00000504101 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
POLR2J3-208ENST00000504101 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
POLR2J3-208ENST00000504101 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
POLR2J3-208ENST00000504101 PRM1P04553 51 aa2.17□□□□□ -2.06
POLR2J3-208ENST00000504101 INE1O15225 51 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 52.6 ms