RNA–Protein interactions for RNA: ENST00000503705.5

CENPE-203, Transcript of centromere protein E, humanhuman

TSL 2

Gene CENPE, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-203ENST00000503705 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
CENPE-203ENST00000503705 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
CENPE-203ENST00000503705 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
CENPE-203ENST00000503705 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
CENPE-203ENST00000503705 NEBP20929 6669 aa3.4□□□□□ -1.87
CENPE-203ENST00000503705 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
CENPE-203ENST00000503705 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
CENPE-203ENST00000503705 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
CENPE-203ENST00000503705 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
CENPE-203ENST00000503705 MT1XP80297 61 aa3.33□□□□□ -1.88
CENPE-203ENST00000503705 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
CENPE-203ENST00000503705 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
CENPE-203ENST00000503705 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
CENPE-203ENST00000503705 INE1O15225 51 aa3.25□□□□□ -1.89
CENPE-203ENST00000503705 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
CENPE-203ENST00000503705 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
CENPE-203ENST00000503705 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
CENPE-203ENST00000503705 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.89
CENPE-203ENST00000503705 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
CENPE-203ENST00000503705 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
CENPE-203ENST00000503705 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
CENPE-203ENST00000503705 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
CENPE-203ENST00000503705 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
CENPE-203ENST00000503705 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
CENPE-203ENST00000503705 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
CENPE-203ENST00000503705 SPRR2EP22531 72 aa3.12□□□□□ -1.91
CENPE-203ENST00000503705 SPRR2BP35325 72 aa3.12□□□□□ -1.91
CENPE-203ENST00000503705 SPRR2AP35326 72 aa3.12□□□□□ -1.91
CENPE-203ENST00000503705 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
CENPE-203ENST00000503705 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
CENPE-203ENST00000503705 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
CENPE-203ENST00000503705 SPRR2DP22532 72 aa3.03□□□□□ -1.92
CENPE-203ENST00000503705 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
CENPE-203ENST00000503705 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
CENPE-203ENST00000503705 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
CENPE-203ENST00000503705 MT1EP04732 61 aa2.96□□□□□ -1.93
CENPE-203ENST00000503705 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
CENPE-203ENST00000503705 KRTAP4-3Q9BYR4 195 aa2.9□□□□□ -1.94
CENPE-203ENST00000503705 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
CENPE-203ENST00000503705 MT1GP13640 62 aa2.88□□□□□ -1.95
CENPE-203ENST00000503705 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
CENPE-203ENST00000503705 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
CENPE-203ENST00000503705 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
CENPE-203ENST00000503705 MT1LQ93083 61 aa2.82□□□□□ -1.96
CENPE-203ENST00000503705 MT1MQ8N339 61 aa2.81□□□□□ -1.96
CENPE-203ENST00000503705 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
CENPE-203ENST00000503705 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
CENPE-203ENST00000503705 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
CENPE-203ENST00000503705 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
CENPE-203ENST00000503705 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
CENPE-203ENST00000503705 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
CENPE-203ENST00000503705 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CENPE-203ENST00000503705 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
CENPE-203ENST00000503705 PRM1P04553 51 aa2.56□□□□□ -2
CENPE-203ENST00000503705 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
CENPE-203ENST00000503705 MT4P47944 62 aa2.54□□□□□ -2
CENPE-203ENST00000503705 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
CENPE-203ENST00000503705 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
CENPE-203ENST00000503705 MT1AP04731 61 aa2.48□□□□□ -2.01
CENPE-203ENST00000503705 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
CENPE-203ENST00000503705 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
CENPE-203ENST00000503705 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CENPE-203ENST00000503705 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
CENPE-203ENST00000503705 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
CENPE-203ENST00000503705 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
CENPE-203ENST00000503705 MT3P25713 68 aa2.19□□□□□ -2.06
CENPE-203ENST00000503705 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
CENPE-203ENST00000503705 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
CENPE-203ENST00000503705 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
CENPE-203ENST00000503705 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
CENPE-203ENST00000503705 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
CENPE-203ENST00000503705 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CENPE-203ENST00000503705 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
CENPE-203ENST00000503705 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
CENPE-203ENST00000503705 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
CENPE-203ENST00000503705 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
CENPE-203ENST00000503705 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
CENPE-203ENST00000503705 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms