RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
SDHA-203ENST00000503674 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
SDHA-203ENST00000503674 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
SDHA-203ENST00000503674 SYNE2Q8WXH0 6885 aaKnown RBP4.77□□□□□ -1.65
SDHA-203ENST00000503674 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
SDHA-203ENST00000503674 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
SDHA-203ENST00000503674 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.66
SDHA-203ENST00000503674 MT1EP04732 61 aa4.63□□□□□ -1.67
SDHA-203ENST00000503674 MT1LQ93083 61 aa4.61□□□□□ -1.67
SDHA-203ENST00000503674 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
SDHA-203ENST00000503674 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
SDHA-203ENST00000503674 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
SDHA-203ENST00000503674 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
SDHA-203ENST00000503674 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
SDHA-203ENST00000503674 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
SDHA-203ENST00000503674 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
SDHA-203ENST00000503674 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
SDHA-203ENST00000503674 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.7
SDHA-203ENST00000503674 MT1GP13640 62 aa4.38□□□□□ -1.71
SDHA-203ENST00000503674 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
SDHA-203ENST00000503674 MT1MQ8N339 61 aa4.35□□□□□ -1.71
SDHA-203ENST00000503674 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
SDHA-203ENST00000503674 NEBP20929 6669 aa4.28□□□□□ -1.72
SDHA-203ENST00000503674 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
SDHA-203ENST00000503674 SPRR2EP22531 72 aa4.23□□□□□ -1.73
SDHA-203ENST00000503674 SPRR2BP35325 72 aa4.23□□□□□ -1.73
SDHA-203ENST00000503674 SPRR2AP35326 72 aa4.23□□□□□ -1.73
SDHA-203ENST00000503674 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
SDHA-203ENST00000503674 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
SDHA-203ENST00000503674 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
SDHA-203ENST00000503674 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
SDHA-203ENST00000503674 MT1AP04731 61 aa4.1□□□□□ -1.75
SDHA-203ENST00000503674 SPRR2DP22532 72 aa4.07□□□□□ -1.76
SDHA-203ENST00000503674 PRM1P04553 51 aa4.06□□□□□ -1.76
SDHA-203ENST00000503674 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
SDHA-203ENST00000503674 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
SDHA-203ENST00000503674 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
SDHA-203ENST00000503674 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
SDHA-203ENST00000503674 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
SDHA-203ENST00000503674 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
SDHA-203ENST00000503674 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
SDHA-203ENST00000503674 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
SDHA-203ENST00000503674 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
SDHA-203ENST00000503674 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
SDHA-203ENST00000503674 MT4P47944 62 aa3.59□□□□□ -1.83
SDHA-203ENST00000503674 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
SDHA-203ENST00000503674 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
SDHA-203ENST00000503674 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
SDHA-203ENST00000503674 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
SDHA-203ENST00000503674 MT3P25713 68 aa3.51□□□□□ -1.85
SDHA-203ENST00000503674 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
SDHA-203ENST00000503674 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
SDHA-203ENST00000503674 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
SDHA-203ENST00000503674 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
SDHA-203ENST00000503674 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
SDHA-203ENST00000503674 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
SDHA-203ENST00000503674 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
SDHA-203ENST00000503674 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
SDHA-203ENST00000503674 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
SDHA-203ENST00000503674 MUC5ACP98088 5654 aa3□□□□□ -1.93
SDHA-203ENST00000503674 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
SDHA-203ENST00000503674 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
SDHA-203ENST00000503674 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
SDHA-203ENST00000503674 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SDHA-203ENST00000503674 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
SDHA-203ENST00000503674 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
SDHA-203ENST00000503674 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SDHA-203ENST00000503674 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
SDHA-203ENST00000503674 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
SDHA-203ENST00000503674 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
SDHA-203ENST00000503674 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
SDHA-203ENST00000503674 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SDHA-203ENST00000503674 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
SDHA-203ENST00000503674 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SDHA-203ENST00000503674 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
SDHA-203ENST00000503674 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
SDHA-203ENST00000503674 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
SDHA-203ENST00000503674 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms