RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 LCE3CQ5T5A8 94 aa7.83□□□□□ -1.16
PTPN13-205ENST00000502971 MUC12Q9UKN1 5478 aa7.82□□□□□ -1.16
PTPN13-205ENST00000502971 NDUFAF8A1L188 74 aa7.82□□□□□ -1.16
PTPN13-205ENST00000502971 MT1LQ93083 61 aa7.81□□□□□ -1.16
PTPN13-205ENST00000502971 SPRR2FQ96RM1 72 aa7.78□□□□□ -1.16
PTPN13-205ENST00000502971 MDN1Q9NU22 5596 aa7.64□□□□□ -1.19
PTPN13-205ENST00000502971 KRTAP19-3Q7Z4W3 81 aa7.59□□□□□ -1.19
PTPN13-205ENST00000502971 NEBP20929 6669 aa7.59□□□□□ -1.19
PTPN13-205ENST00000502971 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
PTPN13-205ENST00000502971 MT1GP13640 62 aa7.55□□□□□ -1.2
PTPN13-205ENST00000502971 LCE1AQ5T7P2 110 aa7.49□□□□□ -1.21
PTPN13-205ENST00000502971 SPRR2EP22531 72 aa7.47□□□□□ -1.21
PTPN13-205ENST00000502971 SPRR2BP35325 72 aa7.47□□□□□ -1.21
PTPN13-205ENST00000502971 SPRR2AP35326 72 aa7.47□□□□□ -1.21
PTPN13-205ENST00000502971 MT1MQ8N339 61 aa7.46□□□□□ -1.22
PTPN13-205ENST00000502971 LCE5AQ5TCM9 118 aa7.44□□□□□ -1.22
PTPN13-205ENST00000502971 KRTAP9-6A8MVA2 160 aa7.39□□□□□ -1.23
PTPN13-205ENST00000502971 KRTAP20-1Q3LI63 56 aa7.38□□□□□ -1.23
PTPN13-205ENST00000502971 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
PTPN13-205ENST00000502971 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
PTPN13-205ENST00000502971 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
PTPN13-205ENST00000502971 SPRR2DP22532 72 aa7.2□□□□□ -1.26
PTPN13-205ENST00000502971 H3BS24 57 aa7.17□□□□□ -1.26
PTPN13-205ENST00000502971 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.26
PTPN13-205ENST00000502971 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.26
PTPN13-205ENST00000502971 DSTQ03001 7570 aaKnown RBP7.07□□□□□ -1.28
PTPN13-205ENST00000502971 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
PTPN13-205ENST00000502971 KRTAP2-2Q9BYT5 123 aa6.95□□□□□ -1.3
PTPN13-205ENST00000502971 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
PTPN13-205ENST00000502971 A0A0A0MQY5 61 aa6.94□□□□□ -1.3
PTPN13-205ENST00000502971 KRTAP5-5Q701N2 237 aaPredicted RBP6.7□□□□□ -1.34
PTPN13-205ENST00000502971 MT1AP04731 61 aa6.64□□□□□ -1.35
PTPN13-205ENST00000502971 KRTAP6-1Q3LI64 71 aa6.56□□□□□ -1.36
PTPN13-205ENST00000502971 INE1O15225 51 aa6.49□□□□□ -1.37
PTPN13-205ENST00000502971 KRTAP5-4Q6L8H1 288 aa6.48□□□□□ -1.37
PTPN13-205ENST00000502971 LCE4AQ5TA78 99 aa6.45□□□□□ -1.38
PTPN13-205ENST00000502971 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
PTPN13-205ENST00000502971 LCE1DQ5T752 114 aa6.31□□□□□ -1.4
PTPN13-205ENST00000502971 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
PTPN13-205ENST00000502971 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
PTPN13-205ENST00000502971 MT4P47944 62 aa6.26□□□□□ -1.41
PTPN13-205ENST00000502971 KRTAP12-4P60329 112 aa6.26□□□□□ -1.41
PTPN13-205ENST00000502971 GPR98Q8WXG9 6306 aa6.26□□□□□ -1.41
PTPN13-205ENST00000502971 HMCN1Q96RW7 5635 aa6.2□□□□□ -1.42
PTPN13-205ENST00000502971 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
PTPN13-205ENST00000502971 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
PTPN13-205ENST00000502971 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
PTPN13-205ENST00000502971 MT3P25713 68 aa6.02□□□□□ -1.45
PTPN13-205ENST00000502971 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
PTPN13-205ENST00000502971 LCE3DQ9BYE3 92 aa5.91□□□□□ -1.46
PTPN13-205ENST00000502971 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
PTPN13-205ENST00000502971 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
PTPN13-205ENST00000502971 KRTAP5-2Q701N4 177 aa5.81□□□□□ -1.48
PTPN13-205ENST00000502971 LCE3EQ5T5B0 92 aa5.78□□□□□ -1.48
PTPN13-205ENST00000502971 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
PTPN13-205ENST00000502971 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.51
PTPN13-205ENST00000502971 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
PTPN13-205ENST00000502971 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
PTPN13-205ENST00000502971 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.55
PTPN13-205ENST00000502971 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
PTPN13-205ENST00000502971 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
PTPN13-205ENST00000502971 PRM1P04553 51 aa5.11□□□□□ -1.59
PTPN13-205ENST00000502971 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
PTPN13-205ENST00000502971 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
PTPN13-205ENST00000502971 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
PTPN13-205ENST00000502971 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
PTPN13-205ENST00000502971 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
PTPN13-205ENST00000502971 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-205ENST00000502971 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-205ENST00000502971 KRTAP21-2Q3LI59 83 aa4.29□□□□□ -1.72
PTPN13-205ENST00000502971 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
PTPN13-205ENST00000502971 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
PTPN13-205ENST00000502971 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
PTPN13-205ENST00000502971 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
PTPN13-205ENST00000502971 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.89
PTPN13-205ENST00000502971 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
PTPN13-205ENST00000502971 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 72.9 ms