RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 V9GYY9 64 aa6.33□□□□□ -1.4
UBE2D3-213ENST00000502690 A8MU10 97 aa6.3□□□□□ -1.4
UBE2D3-213ENST00000502690 UQCR11O14957 56 aa6.29□□□□□ -1.4
UBE2D3-213ENST00000502690 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
UBE2D3-213ENST00000502690 Q1T7F1 81 aa6.27□□□□□ -1.41
UBE2D3-213ENST00000502690 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
UBE2D3-213ENST00000502690 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
UBE2D3-213ENST00000502690 PSPHP1O15172 72 aa6.17□□□□□ -1.42
UBE2D3-213ENST00000502690 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
UBE2D3-213ENST00000502690 MT1GP13640 62 aa6.13□□□□□ -1.43
UBE2D3-213ENST00000502690 MT1MQ8N339 61 aa6.1□□□□□ -1.43
UBE2D3-213ENST00000502690 MT4P47944 62 aa6.09□□□□□ -1.43
UBE2D3-213ENST00000502690 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
UBE2D3-213ENST00000502690 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
UBE2D3-213ENST00000502690 HMCN1Q96RW7 5635 aa6.07□□□□□ -1.44
UBE2D3-213ENST00000502690 MT1LQ93083 61 aa6.05□□□□□ -1.44
UBE2D3-213ENST00000502690 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
UBE2D3-213ENST00000502690 K7ERS5 55 aa6.03□□□□□ -1.44
UBE2D3-213ENST00000502690 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
UBE2D3-213ENST00000502690 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
UBE2D3-213ENST00000502690 A6NED7 52 aa6.01□□□□□ -1.45
UBE2D3-213ENST00000502690 TNP1P09430 55 aa6□□□□□ -1.45
UBE2D3-213ENST00000502690 KRTAP5-4Q6L8H1 288 aa5.95□□□□□ -1.46
UBE2D3-213ENST00000502690 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
UBE2D3-213ENST00000502690 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
UBE2D3-213ENST00000502690 KRTAP5-10Q6L8G5 202 aa5.88□□□□□ -1.47
UBE2D3-213ENST00000502690 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
UBE2D3-213ENST00000502690 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
UBE2D3-213ENST00000502690 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
UBE2D3-213ENST00000502690 KRTAP5-7Q6L8G8 165 aa5.65□□□□□ -1.5
UBE2D3-213ENST00000502690 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
UBE2D3-213ENST00000502690 ROMO1P60602 79 aa5.64□□□□□ -1.51
UBE2D3-213ENST00000502690 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
UBE2D3-213ENST00000502690 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
UBE2D3-213ENST00000502690 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
UBE2D3-213ENST00000502690 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
UBE2D3-213ENST00000502690 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
UBE2D3-213ENST00000502690 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
UBE2D3-213ENST00000502690 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
UBE2D3-213ENST00000502690 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
UBE2D3-213ENST00000502690 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
UBE2D3-213ENST00000502690 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
UBE2D3-213ENST00000502690 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
UBE2D3-213ENST00000502690 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
UBE2D3-213ENST00000502690 MT1AP04731 61 aa5.13□□□□□ -1.59
UBE2D3-213ENST00000502690 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
UBE2D3-213ENST00000502690 PRO0628Q9UI54 55 aa5.05□□□□□ -1.6
UBE2D3-213ENST00000502690 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
UBE2D3-213ENST00000502690 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
UBE2D3-213ENST00000502690 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
UBE2D3-213ENST00000502690 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
UBE2D3-213ENST00000502690 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.62
UBE2D3-213ENST00000502690 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
UBE2D3-213ENST00000502690 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
UBE2D3-213ENST00000502690 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
UBE2D3-213ENST00000502690 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
UBE2D3-213ENST00000502690 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
UBE2D3-213ENST00000502690 MT3P25713 68 aa4.65□□□□□ -1.67
UBE2D3-213ENST00000502690 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-213ENST00000502690 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
UBE2D3-213ENST00000502690 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
UBE2D3-213ENST00000502690 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
UBE2D3-213ENST00000502690 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
UBE2D3-213ENST00000502690 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
UBE2D3-213ENST00000502690 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
UBE2D3-213ENST00000502690 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
UBE2D3-213ENST00000502690 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
UBE2D3-213ENST00000502690 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
UBE2D3-213ENST00000502690 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
UBE2D3-213ENST00000502690 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
UBE2D3-213ENST00000502690 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
UBE2D3-213ENST00000502690 H3BS24 57 aa3.3□□□□□ -1.88
UBE2D3-213ENST00000502690 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
UBE2D3-213ENST00000502690 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
UBE2D3-213ENST00000502690 INE1O15225 51 aa2.95□□□□□ -1.94
UBE2D3-213ENST00000502690 PRM1P04553 51 aa2.88□□□□□ -1.95
UBE2D3-213ENST00000502690 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
UBE2D3-213ENST00000502690 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms