RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
LINC00535-201ENST00000501400 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
LINC00535-201ENST00000501400 KRTAP19-3Q7Z4W3 81 aa6.26□□□□□ -1.41
LINC00535-201ENST00000501400 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
LINC00535-201ENST00000501400 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
LINC00535-201ENST00000501400 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.42
LINC00535-201ENST00000501400 MT1GP13640 62 aa6.18□□□□□ -1.42
LINC00535-201ENST00000501400 MT1MQ8N339 61 aa6.18□□□□□ -1.42
LINC00535-201ENST00000501400 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
LINC00535-201ENST00000501400 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
LINC00535-201ENST00000501400 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
LINC00535-201ENST00000501400 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
LINC00535-201ENST00000501400 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
LINC00535-201ENST00000501400 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
LINC00535-201ENST00000501400 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
LINC00535-201ENST00000501400 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
LINC00535-201ENST00000501400 SPRR2EP22531 72 aa5.89□□□□□ -1.47
LINC00535-201ENST00000501400 SPRR2BP35325 72 aa5.89□□□□□ -1.47
LINC00535-201ENST00000501400 SPRR2AP35326 72 aa5.89□□□□□ -1.47
LINC00535-201ENST00000501400 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.48
LINC00535-201ENST00000501400 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
LINC00535-201ENST00000501400 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
LINC00535-201ENST00000501400 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
LINC00535-201ENST00000501400 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
LINC00535-201ENST00000501400 SPRR2DP22532 72 aa5.67□□□□□ -1.5
LINC00535-201ENST00000501400 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
LINC00535-201ENST00000501400 NEBP20929 6669 aa5.55□□□□□ -1.52
LINC00535-201ENST00000501400 MT1AP04731 61 aa5.47□□□□□ -1.53
LINC00535-201ENST00000501400 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
LINC00535-201ENST00000501400 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
LINC00535-201ENST00000501400 INE1O15225 51 aa5.34□□□□□ -1.55
LINC00535-201ENST00000501400 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
LINC00535-201ENST00000501400 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
LINC00535-201ENST00000501400 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
LINC00535-201ENST00000501400 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
LINC00535-201ENST00000501400 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
LINC00535-201ENST00000501400 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
LINC00535-201ENST00000501400 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
LINC00535-201ENST00000501400 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
LINC00535-201ENST00000501400 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
LINC00535-201ENST00000501400 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
LINC00535-201ENST00000501400 MT4P47944 62 aa4.95□□□□□ -1.62
LINC00535-201ENST00000501400 MT3P25713 68 aa4.91□□□□□ -1.62
LINC00535-201ENST00000501400 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
LINC00535-201ENST00000501400 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
LINC00535-201ENST00000501400 HMCN1Q96RW7 5635 aa4.84□□□□□ -1.63
LINC00535-201ENST00000501400 LCE1DQ5T752 114 aa4.84□□□□□ -1.64
LINC00535-201ENST00000501400 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
LINC00535-201ENST00000501400 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
LINC00535-201ENST00000501400 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
LINC00535-201ENST00000501400 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
LINC00535-201ENST00000501400 PRM1P04553 51 aa4.29□□□□□ -1.72
LINC00535-201ENST00000501400 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
LINC00535-201ENST00000501400 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
LINC00535-201ENST00000501400 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
LINC00535-201ENST00000501400 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
LINC00535-201ENST00000501400 MUC5ACP98088 5654 aa4.09□□□□□ -1.76
LINC00535-201ENST00000501400 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
LINC00535-201ENST00000501400 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
LINC00535-201ENST00000501400 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
LINC00535-201ENST00000501400 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
LINC00535-201ENST00000501400 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
LINC00535-201ENST00000501400 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
LINC00535-201ENST00000501400 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
LINC00535-201ENST00000501400 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
LINC00535-201ENST00000501400 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
LINC00535-201ENST00000501400 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
LINC00535-201ENST00000501400 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
LINC00535-201ENST00000501400 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
LINC00535-201ENST00000501400 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
LINC00535-201ENST00000501400 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
LINC00535-201ENST00000501400 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
LINC00535-201ENST00000501400 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
LINC00535-201ENST00000501400 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
LINC00535-201ENST00000501400 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
LINC00535-201ENST00000501400 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
LINC00535-201ENST00000501400 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 101.5 ms