RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
CCDC171-209ENST00000498725 SCGB1A1P11684 91 aa3.06□□□□□ -1.92
CCDC171-209ENST00000498725 LOC105371267A0A1B0GV96 52 aa3.05□□□□□ -1.92
CCDC171-209ENST00000498725 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
CCDC171-209ENST00000498725 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
CCDC171-209ENST00000498725 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
CCDC171-209ENST00000498725 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
CCDC171-209ENST00000498725 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
CCDC171-209ENST00000498725 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
CCDC171-209ENST00000498725 PCP4L1A6NKN8 68 aa2.95□□□□□ -1.94
CCDC171-209ENST00000498725 TNP1P09430 55 aa2.92□□□□□ -1.94
CCDC171-209ENST00000498725 SEC61GP60059 68 aa2.92□□□□□ -1.94
CCDC171-209ENST00000498725 SNURFQ9Y675 71 aa2.92□□□□□ -1.94
CCDC171-209ENST00000498725 SERP1Q9Y6X1 66 aa2.92□□□□□ -1.94
CCDC171-209ENST00000498725 A0A1B0GU33 70 aa2.9□□□□□ -1.95
CCDC171-209ENST00000498725 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
CCDC171-209ENST00000498725 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
CCDC171-209ENST00000498725 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
CCDC171-209ENST00000498725 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
CCDC171-209ENST00000498725 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CCDC171-209ENST00000498725 COA5Q86WW8 74 aa2.85□□□□□ -1.95
CCDC171-209ENST00000498725 A8MU10 97 aa2.84□□□□□ -1.95
CCDC171-209ENST00000498725 SPANXA2-OT1Q8N9U9 137 aa2.83□□□□□ -1.96
CCDC171-209ENST00000498725 SMIM20Q8N5G0 67 aa2.82□□□□□ -1.96
CCDC171-209ENST00000498725 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
CCDC171-209ENST00000498725 SMIM26A0A096LP01 95 aa2.81□□□□□ -1.96
CCDC171-209ENST00000498725 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CCDC171-209ENST00000498725 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
CCDC171-209ENST00000498725 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CCDC171-209ENST00000498725 J3QR89 54 aa2.77□□□□□ -1.97
CCDC171-209ENST00000498725 SVIPQ8NHG7 77 aa2.77□□□□□ -1.97
CCDC171-209ENST00000498725 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
CCDC171-209ENST00000498725 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
CCDC171-209ENST00000498725 A0A1B0GV90 55 aa2.73□□□□□ -1.97
CCDC171-209ENST00000498725 SERP2Q8N6R1 65 aa2.72□□□□□ -1.97
CCDC171-209ENST00000498725 A0A1B0GU69 56 aa2.7□□□□□ -1.98
CCDC171-209ENST00000498725 MT1AP04731 61 aa2.7□□□□□ -1.98
CCDC171-209ENST00000498725 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
CCDC171-209ENST00000498725 PCP4P48539 62 aa2.66□□□□□ -1.98
CCDC171-209ENST00000498725 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
CCDC171-209ENST00000498725 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
CCDC171-209ENST00000498725 H7BZZ5 65 aa2.51□□□□□ -2.01
CCDC171-209ENST00000498725 K7ERU9 68 aa2.51□□□□□ -2.01
CCDC171-209ENST00000498725 PRR15LQ9BU68 103 aa2.5□□□□□ -2.01
CCDC171-209ENST00000498725 COX7CP15954 63 aa2.47□□□□□ -2.01
CCDC171-209ENST00000498725 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
CCDC171-209ENST00000498725 UQCR11O14957 56 aa2.41□□□□□ -2.02
CCDC171-209ENST00000498725 LINC01558Q9Y6Z2 57 aa2.38□□□□□ -2.03
CCDC171-209ENST00000498725 K7ERS5 55 aa2.35□□□□□ -2.03
CCDC171-209ENST00000498725 MIR22HGQ0VDD5 57 aa2.34□□□□□ -2.03
CCDC171-209ENST00000498725 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
CCDC171-209ENST00000498725 RPS28P62857 69 aaKnown RBP2.29□□□□□ -2.04
CCDC171-209ENST00000498725 NDUFAF8A1L188 74 aa2.25□□□□□ -2.05
CCDC171-209ENST00000498725 PRAC1Q96KF2 57 aa2.25□□□□□ -2.05
CCDC171-209ENST00000498725 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
CCDC171-209ENST00000498725 ATP5EP56381 51 aaPredicted RBP2.22□□□□□ -2.05
CCDC171-209ENST00000498725 ANAPC13Q9BS18 74 aa2.22□□□□□ -2.05
CCDC171-209ENST00000498725 CCDC179H3BU77 68 aa2.21□□□□□ -2.06
CCDC171-209ENST00000498725 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
CCDC171-209ENST00000498725 PSPHP1O15172 72 aa2.15□□□□□ -2.07
CCDC171-209ENST00000498725 Q1T7F1 81 aa2.14□□□□□ -2.07
CCDC171-209ENST00000498725 ROMO1P60602 79 aa2.13□□□□□ -2.07
CCDC171-209ENST00000498725 A6NED7 52 aa2.04□□□□□ -2.08
CCDC171-209ENST00000498725 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CCDC171-209ENST00000498725 TMEM258P61165 79 aa2.04□□□□□ -2.08
CCDC171-209ENST00000498725 V9GYY9 64 aa2□□□□□ -2.09
CCDC171-209ENST00000498725 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CCDC171-209ENST00000498725 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
CCDC171-209ENST00000498725 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
CCDC171-209ENST00000498725 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CCDC171-209ENST00000498725 BRK1Q8WUW1 75 aa1.35□□□□□ -2.19
CCDC171-209ENST00000498725 PMAIP1Q13794 54 aa1.22□□□□□ -2.21
CCDC171-209ENST00000498725 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
CCDC171-209ENST00000498725 LUZP6Q538Z0 58 aa1.13□□□□□ -2.23
CCDC171-209ENST00000498725 PRM1P04553 51 aa1.1□□□□□ -2.23
CCDC171-209ENST00000498725 KTN1-AS1Q86SY8 53 aa0.82□□□□□ -2.28
CCDC171-209ENST00000498725 PRO0628Q9UI54 55 aa0.81□□□□□ -2.28
CCDC171-209ENST00000498725 INE1O15225 51 aa0.26□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 45.8 ms