RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
CNOT4-211ENST00000498534 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
CNOT4-211ENST00000498534 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
CNOT4-211ENST00000498534 A0A1B0GU33 70 aa4.28□□□□□ -1.72
CNOT4-211ENST00000498534 K7ERU9 68 aa4.28□□□□□ -1.72
CNOT4-211ENST00000498534 COA5Q86WW8 74 aa4.28□□□□□ -1.72
CNOT4-211ENST00000498534 MT1MQ8N339 61 aa4.28□□□□□ -1.72
CNOT4-211ENST00000498534 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
CNOT4-211ENST00000498534 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
CNOT4-211ENST00000498534 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
CNOT4-211ENST00000498534 MT1LQ93083 61 aa4.24□□□□□ -1.73
CNOT4-211ENST00000498534 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
CNOT4-211ENST00000498534 SMIM26A0A096LP01 95 aa4.18□□□□□ -1.74
CNOT4-211ENST00000498534 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
CNOT4-211ENST00000498534 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
CNOT4-211ENST00000498534 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
CNOT4-211ENST00000498534 TNP1P09430 55 aa4.15□□□□□ -1.75
CNOT4-211ENST00000498534 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
CNOT4-211ENST00000498534 A0A1B0GU69 56 aa4.11□□□□□ -1.75
CNOT4-211ENST00000498534 A8MU10 97 aa4.09□□□□□ -1.75
CNOT4-211ENST00000498534 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
CNOT4-211ENST00000498534 COX7CP15954 63 aa4.05□□□□□ -1.76
CNOT4-211ENST00000498534 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
CNOT4-211ENST00000498534 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
CNOT4-211ENST00000498534 H7BZZ5 65 aa4.02□□□□□ -1.77
CNOT4-211ENST00000498534 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
CNOT4-211ENST00000498534 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
CNOT4-211ENST00000498534 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
CNOT4-211ENST00000498534 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
CNOT4-211ENST00000498534 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
CNOT4-211ENST00000498534 PRR15LQ9BU68 103 aa3.94□□□□□ -1.78
CNOT4-211ENST00000498534 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
CNOT4-211ENST00000498534 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
CNOT4-211ENST00000498534 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
CNOT4-211ENST00000498534 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
CNOT4-211ENST00000498534 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
CNOT4-211ENST00000498534 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
CNOT4-211ENST00000498534 UQCR11O14957 56 aa3.79□□□□□ -1.8
CNOT4-211ENST00000498534 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
CNOT4-211ENST00000498534 ATP5EP56381 51 aaPredicted RBP3.76□□□□□ -1.81
CNOT4-211ENST00000498534 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
CNOT4-211ENST00000498534 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
CNOT4-211ENST00000498534 K7ERS5 55 aa3.7□□□□□ -1.82
CNOT4-211ENST00000498534 MIR22HGQ0VDD5 57 aa3.67□□□□□ -1.82
CNOT4-211ENST00000498534 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
CNOT4-211ENST00000498534 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
CNOT4-211ENST00000498534 MT1AP04731 61 aa3.61□□□□□ -1.83
CNOT4-211ENST00000498534 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
CNOT4-211ENST00000498534 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
CNOT4-211ENST00000498534 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
CNOT4-211ENST00000498534 TMEM258P61165 79 aa3.56□□□□□ -1.84
CNOT4-211ENST00000498534 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
CNOT4-211ENST00000498534 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CNOT4-211ENST00000498534 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
CNOT4-211ENST00000498534 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
CNOT4-211ENST00000498534 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
CNOT4-211ENST00000498534 PSPHP1O15172 72 aa3.47□□□□□ -1.85
CNOT4-211ENST00000498534 V9GYY9 64 aa3.47□□□□□ -1.85
CNOT4-211ENST00000498534 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
CNOT4-211ENST00000498534 Q1T7F1 81 aa3.43□□□□□ -1.86
CNOT4-211ENST00000498534 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
CNOT4-211ENST00000498534 A6NED7 52 aa3.36□□□□□ -1.87
CNOT4-211ENST00000498534 ROMO1P60602 79 aa3.36□□□□□ -1.87
CNOT4-211ENST00000498534 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
CNOT4-211ENST00000498534 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
CNOT4-211ENST00000498534 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CNOT4-211ENST00000498534 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
CNOT4-211ENST00000498534 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
CNOT4-211ENST00000498534 PMAIP1Q13794 54 aa2.45□□□□□ -2.02
CNOT4-211ENST00000498534 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CNOT4-211ENST00000498534 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
CNOT4-211ENST00000498534 LUZP6Q538Z0 58 aa2.13□□□□□ -2.07
CNOT4-211ENST00000498534 PRO0628Q9UI54 55 aa2.05□□□□□ -2.08
CNOT4-211ENST00000498534 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
CNOT4-211ENST00000498534 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
CNOT4-211ENST00000498534 PRM1P04553 51 aa1.68□□□□□ -2.14
CNOT4-211ENST00000498534 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
CNOT4-211ENST00000498534 INE1O15225 51 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 97.9 ms