RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 K7ERS5 55 aa4.64□□□□□ -1.67
HSPG2-213ENST00000498495 MT1GP13640 62 aa4.62□□□□□ -1.67
HSPG2-213ENST00000498495 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
HSPG2-213ENST00000498495 A6NED7 52 aa4.55□□□□□ -1.68
HSPG2-213ENST00000498495 MT1LQ93083 61 aa4.55□□□□□ -1.68
HSPG2-213ENST00000498495 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
HSPG2-213ENST00000498495 MT1MQ8N339 61 aa4.51□□□□□ -1.69
HSPG2-213ENST00000498495 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
HSPG2-213ENST00000498495 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
HSPG2-213ENST00000498495 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
HSPG2-213ENST00000498495 CDC42SE1Q9NRR8 79 aa4.39□□□□□ -1.71
HSPG2-213ENST00000498495 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
HSPG2-213ENST00000498495 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
HSPG2-213ENST00000498495 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
HSPG2-213ENST00000498495 ROMO1P60602 79 aa4.32□□□□□ -1.72
HSPG2-213ENST00000498495 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
HSPG2-213ENST00000498495 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
HSPG2-213ENST00000498495 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
HSPG2-213ENST00000498495 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
HSPG2-213ENST00000498495 MT4P47944 62 aa4.25□□□□□ -1.73
HSPG2-213ENST00000498495 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
HSPG2-213ENST00000498495 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
HSPG2-213ENST00000498495 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
HSPG2-213ENST00000498495 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
HSPG2-213ENST00000498495 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
HSPG2-213ENST00000498495 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
HSPG2-213ENST00000498495 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
HSPG2-213ENST00000498495 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
HSPG2-213ENST00000498495 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
HSPG2-213ENST00000498495 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
HSPG2-213ENST00000498495 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
HSPG2-213ENST00000498495 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
HSPG2-213ENST00000498495 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
HSPG2-213ENST00000498495 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
HSPG2-213ENST00000498495 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
HSPG2-213ENST00000498495 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
HSPG2-213ENST00000498495 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
HSPG2-213ENST00000498495 MT1AP04731 61 aa3.88□□□□□ -1.79
HSPG2-213ENST00000498495 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
HSPG2-213ENST00000498495 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
HSPG2-213ENST00000498495 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
HSPG2-213ENST00000498495 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
HSPG2-213ENST00000498495 SVIPQ8NHG7 77 aa3.81□□□□□ -1.8
HSPG2-213ENST00000498495 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
HSPG2-213ENST00000498495 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
HSPG2-213ENST00000498495 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
HSPG2-213ENST00000498495 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
HSPG2-213ENST00000498495 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
HSPG2-213ENST00000498495 MT3P25713 68 aa3.57□□□□□ -1.84
HSPG2-213ENST00000498495 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
HSPG2-213ENST00000498495 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
HSPG2-213ENST00000498495 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
HSPG2-213ENST00000498495 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
HSPG2-213ENST00000498495 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
HSPG2-213ENST00000498495 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
HSPG2-213ENST00000498495 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
HSPG2-213ENST00000498495 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
HSPG2-213ENST00000498495 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
HSPG2-213ENST00000498495 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
HSPG2-213ENST00000498495 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
HSPG2-213ENST00000498495 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
HSPG2-213ENST00000498495 NDUFAF8A1L188 74 aa3□□□□□ -1.93
HSPG2-213ENST00000498495 LCE1CQ5T751 118 aa3□□□□□ -1.93
HSPG2-213ENST00000498495 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
HSPG2-213ENST00000498495 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
HSPG2-213ENST00000498495 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
HSPG2-213ENST00000498495 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
HSPG2-213ENST00000498495 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
HSPG2-213ENST00000498495 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
HSPG2-213ENST00000498495 H3BS24 57 aa2.56□□□□□ -2
HSPG2-213ENST00000498495 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
HSPG2-213ENST00000498495 INE1O15225 51 aa2.49□□□□□ -2.01
HSPG2-213ENST00000498495 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
HSPG2-213ENST00000498495 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
HSPG2-213ENST00000498495 PRM1P04553 51 aa2.21□□□□□ -2.06
HSPG2-213ENST00000498495 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
HSPG2-213ENST00000498495 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
HSPG2-213ENST00000498495 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 84.5 ms