RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
RTCB-206ENST00000498434 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
RTCB-206ENST00000498434 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
RTCB-206ENST00000498434 MT3P25713 68 aa3.72□□□□□ -1.81
RTCB-206ENST00000498434 MT2AP02795 61 aa3.68□□□□□ -1.82
RTCB-206ENST00000498434 MT1FP04733 61 aa3.64□□□□□ -1.83
RTCB-206ENST00000498434 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
RTCB-206ENST00000498434 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
RTCB-206ENST00000498434 TNP1P09430 55 aa3.6□□□□□ -1.83
RTCB-206ENST00000498434 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
RTCB-206ENST00000498434 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.83
RTCB-206ENST00000498434 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
RTCB-206ENST00000498434 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
RTCB-206ENST00000498434 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
RTCB-206ENST00000498434 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
RTCB-206ENST00000498434 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
RTCB-206ENST00000498434 MT1BP07438 61 aa3.47□□□□□ -1.85
RTCB-206ENST00000498434 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.87
RTCB-206ENST00000498434 MT1XP80297 61 aa3.39□□□□□ -1.87
RTCB-206ENST00000498434 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
RTCB-206ENST00000498434 USH2AO75445 5202 aa3.37□□□□□ -1.87
RTCB-206ENST00000498434 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
RTCB-206ENST00000498434 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
RTCB-206ENST00000498434 NEBP20929 6669 aa3.31□□□□□ -1.88
RTCB-206ENST00000498434 INE1O15225 51 aa3.31□□□□□ -1.88
RTCB-206ENST00000498434 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
RTCB-206ENST00000498434 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
RTCB-206ENST00000498434 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
RTCB-206ENST00000498434 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
RTCB-206ENST00000498434 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
RTCB-206ENST00000498434 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
RTCB-206ENST00000498434 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
RTCB-206ENST00000498434 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
RTCB-206ENST00000498434 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
RTCB-206ENST00000498434 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
RTCB-206ENST00000498434 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
RTCB-206ENST00000498434 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
RTCB-206ENST00000498434 KMT2DO14686 5537 aa3.02□□□□□ -1.93
RTCB-206ENST00000498434 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
RTCB-206ENST00000498434 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
RTCB-206ENST00000498434 MT1EP04732 61 aa2.98□□□□□ -1.93
RTCB-206ENST00000498434 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
RTCB-206ENST00000498434 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
RTCB-206ENST00000498434 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
RTCB-206ENST00000498434 MT1LQ93083 61 aa2.95□□□□□ -1.94
RTCB-206ENST00000498434 SPRR2EP22531 72 aa2.93□□□□□ -1.94
RTCB-206ENST00000498434 SPRR2BP35325 72 aa2.93□□□□□ -1.94
RTCB-206ENST00000498434 SPRR2AP35326 72 aa2.93□□□□□ -1.94
RTCB-206ENST00000498434 MT1GP13640 62 aa2.9□□□□□ -1.95
RTCB-206ENST00000498434 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
RTCB-206ENST00000498434 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
RTCB-206ENST00000498434 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
RTCB-206ENST00000498434 SPRR2DP22532 72 aa2.84□□□□□ -1.95
RTCB-206ENST00000498434 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
RTCB-206ENST00000498434 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
RTCB-206ENST00000498434 MT1MQ8N339 61 aa2.81□□□□□ -1.96
RTCB-206ENST00000498434 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
RTCB-206ENST00000498434 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
RTCB-206ENST00000498434 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
RTCB-206ENST00000498434 MT1AP04731 61 aa2.53□□□□□ -2
RTCB-206ENST00000498434 MT4P47944 62 aa2.53□□□□□ -2
RTCB-206ENST00000498434 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
RTCB-206ENST00000498434 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
RTCB-206ENST00000498434 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
RTCB-206ENST00000498434 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
RTCB-206ENST00000498434 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
RTCB-206ENST00000498434 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
RTCB-206ENST00000498434 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
RTCB-206ENST00000498434 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
RTCB-206ENST00000498434 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
RTCB-206ENST00000498434 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
RTCB-206ENST00000498434 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
RTCB-206ENST00000498434 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
RTCB-206ENST00000498434 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
RTCB-206ENST00000498434 PRM1P04553 51 aa1.97□□□□□ -2.09
RTCB-206ENST00000498434 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
RTCB-206ENST00000498434 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
RTCB-206ENST00000498434 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 240.9 ms