RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SERP1Q9Y6X1 66 aa3.81□□□□□ -1.8
CDK9-205ENST00000498339 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
CDK9-205ENST00000498339 SPANXA2-OT1Q8N9U9 137 aa3.8□□□□□ -1.8
CDK9-205ENST00000498339 TNP1P09430 55 aa3.79□□□□□ -1.8
CDK9-205ENST00000498339 AHNAKQ09666 5890 aaKnown RBP3.79□□□□□ -1.8
CDK9-205ENST00000498339 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
CDK9-205ENST00000498339 SNURFQ9Y675 71 aa3.78□□□□□ -1.8
CDK9-205ENST00000498339 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
CDK9-205ENST00000498339 A0A1B0GU33 70 aa3.74□□□□□ -1.81
CDK9-205ENST00000498339 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
CDK9-205ENST00000498339 CCDC179H3BU77 68 aa3.73□□□□□ -1.81
CDK9-205ENST00000498339 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
CDK9-205ENST00000498339 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
CDK9-205ENST00000498339 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
CDK9-205ENST00000498339 COX7CP15954 63 aa3.68□□□□□ -1.82
CDK9-205ENST00000498339 COA5Q86WW8 74 aa3.67□□□□□ -1.82
CDK9-205ENST00000498339 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
CDK9-205ENST00000498339 SMIM26A0A096LP01 95 aa3.65□□□□□ -1.83
CDK9-205ENST00000498339 A8MU10 97 aa3.63□□□□□ -1.83
CDK9-205ENST00000498339 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
CDK9-205ENST00000498339 H7BZZ5 65 aa3.61□□□□□ -1.83
CDK9-205ENST00000498339 TMEM258P61165 79 aa3.6□□□□□ -1.83
CDK9-205ENST00000498339 SVIPQ8NHG7 77 aa3.6□□□□□ -1.83
CDK9-205ENST00000498339 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
CDK9-205ENST00000498339 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CDK9-205ENST00000498339 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
CDK9-205ENST00000498339 A0A1B0GU69 56 aa3.53□□□□□ -1.84
CDK9-205ENST00000498339 ATP5EP56381 51 aaPredicted RBP3.49□□□□□ -1.85
CDK9-205ENST00000498339 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
CDK9-205ENST00000498339 MT1AP04731 61 aa3.48□□□□□ -1.85
CDK9-205ENST00000498339 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
CDK9-205ENST00000498339 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
CDK9-205ENST00000498339 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
CDK9-205ENST00000498339 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
CDK9-205ENST00000498339 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
CDK9-205ENST00000498339 PRR15LQ9BU68 103 aa3.38□□□□□ -1.87
CDK9-205ENST00000498339 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
CDK9-205ENST00000498339 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
CDK9-205ENST00000498339 Q1T7F1 81 aa3.31□□□□□ -1.88
CDK9-205ENST00000498339 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
CDK9-205ENST00000498339 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
CDK9-205ENST00000498339 V9GYY9 64 aa3.28□□□□□ -1.88
CDK9-205ENST00000498339 UQCR11O14957 56 aa3.27□□□□□ -1.89
CDK9-205ENST00000498339 BRK1Q8WUW1 75 aa3.25□□□□□ -1.89
CDK9-205ENST00000498339 PSPHP1O15172 72 aa3.21□□□□□ -1.9
CDK9-205ENST00000498339 MT3P25713 68 aa3.21□□□□□ -1.9
CDK9-205ENST00000498339 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
CDK9-205ENST00000498339 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
CDK9-205ENST00000498339 KRTAP23-1A1A580 65 aa3.14□□□□□ -1.91
CDK9-205ENST00000498339 A6NED7 52 aa3.12□□□□□ -1.91
CDK9-205ENST00000498339 K7ERS5 55 aa3.12□□□□□ -1.91
CDK9-205ENST00000498339 CDC42SE1Q9NRR8 79 aa3.12□□□□□ -1.91
CDK9-205ENST00000498339 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
CDK9-205ENST00000498339 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
CDK9-205ENST00000498339 LCE1EQ5T753 118 aa3□□□□□ -1.93
CDK9-205ENST00000498339 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
CDK9-205ENST00000498339 ROMO1P60602 79 aa2.91□□□□□ -1.94
CDK9-205ENST00000498339 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
CDK9-205ENST00000498339 PRAC1Q96KF2 57 aa2.86□□□□□ -1.95
CDK9-205ENST00000498339 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
CDK9-205ENST00000498339 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
CDK9-205ENST00000498339 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
CDK9-205ENST00000498339 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
CDK9-205ENST00000498339 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
CDK9-205ENST00000498339 H3BS24 57 aa2.49□□□□□ -2.01
CDK9-205ENST00000498339 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
CDK9-205ENST00000498339 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
CDK9-205ENST00000498339 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CDK9-205ENST00000498339 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
CDK9-205ENST00000498339 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CDK9-205ENST00000498339 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
CDK9-205ENST00000498339 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
CDK9-205ENST00000498339 A0A0A0MQY5 61 aa2.17□□□□□ -2.06
CDK9-205ENST00000498339 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
CDK9-205ENST00000498339 INE1O15225 51 aa2□□□□□ -2.09
CDK9-205ENST00000498339 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
CDK9-205ENST00000498339 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
CDK9-205ENST00000498339 PRM1P04553 51 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms