RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
ABCF3-218ENST00000498136 MT1LQ93083 61 aa5.95□□□□□ -1.46
ABCF3-218ENST00000498136 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
ABCF3-218ENST00000498136 A6NED7 52 aa5.92□□□□□ -1.46
ABCF3-218ENST00000498136 H3BS24 57 aa5.92□□□□□ -1.46
ABCF3-218ENST00000498136 PCP4P48539 62 aa5.91□□□□□ -1.46
ABCF3-218ENST00000498136 MT1MQ8N339 61 aa5.9□□□□□ -1.46
ABCF3-218ENST00000498136 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
ABCF3-218ENST00000498136 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
ABCF3-218ENST00000498136 RPS28P62857 69 aaKnown RBP5.83□□□□□ -1.48
ABCF3-218ENST00000498136 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
ABCF3-218ENST00000498136 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
ABCF3-218ENST00000498136 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
ABCF3-218ENST00000498136 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
ABCF3-218ENST00000498136 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
ABCF3-218ENST00000498136 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
ABCF3-218ENST00000498136 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
ABCF3-218ENST00000498136 ROMO1P60602 79 aa5.6□□□□□ -1.51
ABCF3-218ENST00000498136 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
ABCF3-218ENST00000498136 MT4P47944 62 aa5.59□□□□□ -1.51
ABCF3-218ENST00000498136 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
ABCF3-218ENST00000498136 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
ABCF3-218ENST00000498136 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
ABCF3-218ENST00000498136 HMCN1Q96RW7 5635 aa5.43□□□□□ -1.54
ABCF3-218ENST00000498136 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
ABCF3-218ENST00000498136 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.54
ABCF3-218ENST00000498136 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
ABCF3-218ENST00000498136 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
ABCF3-218ENST00000498136 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
ABCF3-218ENST00000498136 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
ABCF3-218ENST00000498136 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
ABCF3-218ENST00000498136 BRK1Q8WUW1 75 aa5.22□□□□□ -1.57
ABCF3-218ENST00000498136 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
ABCF3-218ENST00000498136 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
ABCF3-218ENST00000498136 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
ABCF3-218ENST00000498136 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
ABCF3-218ENST00000498136 MT1AP04731 61 aa5.07□□□□□ -1.6
ABCF3-218ENST00000498136 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
ABCF3-218ENST00000498136 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
ABCF3-218ENST00000498136 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
ABCF3-218ENST00000498136 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
ABCF3-218ENST00000498136 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
ABCF3-218ENST00000498136 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
ABCF3-218ENST00000498136 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
ABCF3-218ENST00000498136 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
ABCF3-218ENST00000498136 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
ABCF3-218ENST00000498136 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
ABCF3-218ENST00000498136 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
ABCF3-218ENST00000498136 MT3P25713 68 aa4.65□□□□□ -1.67
ABCF3-218ENST00000498136 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
ABCF3-218ENST00000498136 KRTAP5-8O75690 187 aa4.56□□□□□ -1.68
ABCF3-218ENST00000498136 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
ABCF3-218ENST00000498136 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
ABCF3-218ENST00000498136 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
ABCF3-218ENST00000498136 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
ABCF3-218ENST00000498136 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
ABCF3-218ENST00000498136 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
ABCF3-218ENST00000498136 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
ABCF3-218ENST00000498136 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
ABCF3-218ENST00000498136 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
ABCF3-218ENST00000498136 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
ABCF3-218ENST00000498136 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
ABCF3-218ENST00000498136 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
ABCF3-218ENST00000498136 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
ABCF3-218ENST00000498136 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
ABCF3-218ENST00000498136 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
ABCF3-218ENST00000498136 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
ABCF3-218ENST00000498136 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
ABCF3-218ENST00000498136 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
ABCF3-218ENST00000498136 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
ABCF3-218ENST00000498136 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
ABCF3-218ENST00000498136 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
ABCF3-218ENST00000498136 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
ABCF3-218ENST00000498136 PRM1P04553 51 aa2.88□□□□□ -1.95
ABCF3-218ENST00000498136 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
ABCF3-218ENST00000498136 INE1O15225 51 aa2.61□□□□□ -1.99
ABCF3-218ENST00000498136 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
ABCF3-218ENST00000498136 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms