RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 KRTAP19-5Q3LI72 72 aa7.34□□□□□ -1.23
HLA-B-255ENST00000498007 KRTAP2-3P0C7H8 128 aa7.28□□□□□ -1.24
HLA-B-255ENST00000498007 KRTAP2-4Q9BYR9 128 aa7.28□□□□□ -1.24
HLA-B-255ENST00000498007 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.26
HLA-B-255ENST00000498007 KRTAP19-3Q7Z4W3 81 aa7.21□□□□□ -1.26
HLA-B-255ENST00000498007 LCE5AQ5TCM9 118 aa7.16□□□□□ -1.26
HLA-B-255ENST00000498007 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
HLA-B-255ENST00000498007 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
HLA-B-255ENST00000498007 ROMO1P60602 79 aa7.09□□□□□ -1.27
HLA-B-255ENST00000498007 MT1LQ93083 61 aa7.07□□□□□ -1.28
HLA-B-255ENST00000498007 KRTAP2-2Q9BYT5 123 aa7.07□□□□□ -1.28
HLA-B-255ENST00000498007 KRTAP2-1Q9BYU5 128 aa7.07□□□□□ -1.28
HLA-B-255ENST00000498007 MT1GP13640 62 aa7.05□□□□□ -1.28
HLA-B-255ENST00000498007 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
HLA-B-255ENST00000498007 PP632Q6XCG6 107 aa7.02□□□□□ -1.29
HLA-B-255ENST00000498007 MT1MQ8N339 61 aa6.97□□□□□ -1.29
HLA-B-255ENST00000498007 DSTQ03001 7570 aaKnown RBP6.92□□□□□ -1.3
HLA-B-255ENST00000498007 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
HLA-B-255ENST00000498007 KRTAP4-3Q9BYR4 195 aa6.82□□□□□ -1.32
HLA-B-255ENST00000498007 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
HLA-B-255ENST00000498007 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
HLA-B-255ENST00000498007 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
HLA-B-255ENST00000498007 KRTAP4-9Q9BYQ8 210 aa6.54□□□□□ -1.36
HLA-B-255ENST00000498007 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
HLA-B-255ENST00000498007 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
HLA-B-255ENST00000498007 MT4P47944 62 aa6.42□□□□□ -1.38
HLA-B-255ENST00000498007 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
HLA-B-255ENST00000498007 KRTAP5-4Q6L8H1 288 aa6.41□□□□□ -1.38
HLA-B-255ENST00000498007 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
HLA-B-255ENST00000498007 HMCN1Q96RW7 5635 aa6.35□□□□□ -1.39
HLA-B-255ENST00000498007 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
HLA-B-255ENST00000498007 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
HLA-B-255ENST00000498007 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
HLA-B-255ENST00000498007 GPR98Q8WXG9 6306 aa6.11□□□□□ -1.43
HLA-B-255ENST00000498007 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
HLA-B-255ENST00000498007 KRTAP20-2Q3LI61 65 aa6.06□□□□□ -1.44
HLA-B-255ENST00000498007 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
HLA-B-255ENST00000498007 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
HLA-B-255ENST00000498007 MT1AP04731 61 aa6.02□□□□□ -1.45
HLA-B-255ENST00000498007 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
HLA-B-255ENST00000498007 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
HLA-B-255ENST00000498007 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
HLA-B-255ENST00000498007 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
HLA-B-255ENST00000498007 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
HLA-B-255ENST00000498007 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
HLA-B-255ENST00000498007 KRTAP5-10Q6L8G5 202 aa5.76□□□□□ -1.49
HLA-B-255ENST00000498007 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
HLA-B-255ENST00000498007 H3BS24 57 aa5.66□□□□□ -1.5
HLA-B-255ENST00000498007 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
HLA-B-255ENST00000498007 MT3P25713 68 aa5.48□□□□□ -1.53
HLA-B-255ENST00000498007 KRTAP5-7Q6L8G8 165 aa5.48□□□□□ -1.53
HLA-B-255ENST00000498007 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
HLA-B-255ENST00000498007 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
HLA-B-255ENST00000498007 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
HLA-B-255ENST00000498007 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
HLA-B-255ENST00000498007 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
HLA-B-255ENST00000498007 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
HLA-B-255ENST00000498007 INE1O15225 51 aa4.92□□□□□ -1.62
HLA-B-255ENST00000498007 LCE1EQ5T753 118 aa4.92□□□□□ -1.62
HLA-B-255ENST00000498007 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
HLA-B-255ENST00000498007 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
HLA-B-255ENST00000498007 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.64
HLA-B-255ENST00000498007 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
HLA-B-255ENST00000498007 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
HLA-B-255ENST00000498007 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
HLA-B-255ENST00000498007 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
HLA-B-255ENST00000498007 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
HLA-B-255ENST00000498007 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
HLA-B-255ENST00000498007 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
HLA-B-255ENST00000498007 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
HLA-B-255ENST00000498007 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
HLA-B-255ENST00000498007 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
HLA-B-255ENST00000498007 PRM1P04553 51 aa3.69□□□□□ -1.82
HLA-B-255ENST00000498007 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
HLA-B-255ENST00000498007 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
HLA-B-255ENST00000498007 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
HLA-B-255ENST00000498007 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
HLA-B-255ENST00000498007 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms