RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
ATPAF2-209ENST00000497871 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
ATPAF2-209ENST00000497871 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
ATPAF2-209ENST00000497871 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
ATPAF2-209ENST00000497871 TNP1P09430 55 aa6.28□□□□□ -1.4
ATPAF2-209ENST00000497871 KRTAP5-10Q6L8G5 202 aa6.27□□□□□ -1.41
ATPAF2-209ENST00000497871 A0A1B0GU69 56 aa6.25□□□□□ -1.41
ATPAF2-209ENST00000497871 A8MU10 97 aa6.24□□□□□ -1.41
ATPAF2-209ENST00000497871 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
ATPAF2-209ENST00000497871 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
ATPAF2-209ENST00000497871 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
ATPAF2-209ENST00000497871 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
ATPAF2-209ENST00000497871 KRTAP20-2Q3LI61 65 aa6.02□□□□□ -1.45
ATPAF2-209ENST00000497871 RPS28P62857 69 aaKnown RBP6.01□□□□□ -1.45
ATPAF2-209ENST00000497871 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
ATPAF2-209ENST00000497871 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
ATPAF2-209ENST00000497871 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
ATPAF2-209ENST00000497871 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
ATPAF2-209ENST00000497871 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
ATPAF2-209ENST00000497871 Q1T7F1 81 aa5.9□□□□□ -1.46
ATPAF2-209ENST00000497871 V9GYY9 64 aa5.86□□□□□ -1.47
ATPAF2-209ENST00000497871 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
ATPAF2-209ENST00000497871 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
ATPAF2-209ENST00000497871 PSPHP1O15172 72 aa5.81□□□□□ -1.48
ATPAF2-209ENST00000497871 UQCR11O14957 56 aa5.78□□□□□ -1.48
ATPAF2-209ENST00000497871 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
ATPAF2-209ENST00000497871 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
ATPAF2-209ENST00000497871 MIR22HGQ0VDD5 57 aa5.62□□□□□ -1.51
ATPAF2-209ENST00000497871 A6NED7 52 aa5.61□□□□□ -1.51
ATPAF2-209ENST00000497871 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
ATPAF2-209ENST00000497871 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
ATPAF2-209ENST00000497871 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
ATPAF2-209ENST00000497871 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
ATPAF2-209ENST00000497871 K7ERS5 55 aa5.57□□□□□ -1.52
ATPAF2-209ENST00000497871 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
ATPAF2-209ENST00000497871 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
ATPAF2-209ENST00000497871 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
ATPAF2-209ENST00000497871 MT1AP04731 61 aa5.49□□□□□ -1.53
ATPAF2-209ENST00000497871 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
ATPAF2-209ENST00000497871 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
ATPAF2-209ENST00000497871 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
ATPAF2-209ENST00000497871 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
ATPAF2-209ENST00000497871 AHNAKQ09666 5890 aaKnown RBP5.3□□□□□ -1.56
ATPAF2-209ENST00000497871 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
ATPAF2-209ENST00000497871 MUC5BQ9HC84 5762 aaPredicted RBP5.28□□□□□ -1.56
ATPAF2-209ENST00000497871 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
ATPAF2-209ENST00000497871 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
ATPAF2-209ENST00000497871 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
ATPAF2-209ENST00000497871 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
ATPAF2-209ENST00000497871 ROMO1P60602 79 aa5.16□□□□□ -1.58
ATPAF2-209ENST00000497871 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
ATPAF2-209ENST00000497871 MT3P25713 68 aa5.06□□□□□ -1.6
ATPAF2-209ENST00000497871 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
ATPAF2-209ENST00000497871 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
ATPAF2-209ENST00000497871 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
ATPAF2-209ENST00000497871 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
ATPAF2-209ENST00000497871 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
ATPAF2-209ENST00000497871 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
ATPAF2-209ENST00000497871 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
ATPAF2-209ENST00000497871 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
ATPAF2-209ENST00000497871 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
ATPAF2-209ENST00000497871 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
ATPAF2-209ENST00000497871 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
ATPAF2-209ENST00000497871 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
ATPAF2-209ENST00000497871 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
ATPAF2-209ENST00000497871 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
ATPAF2-209ENST00000497871 H3BS24 57 aa3.82□□□□□ -1.8
ATPAF2-209ENST00000497871 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
ATPAF2-209ENST00000497871 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
ATPAF2-209ENST00000497871 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
ATPAF2-209ENST00000497871 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
ATPAF2-209ENST00000497871 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
ATPAF2-209ENST00000497871 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
ATPAF2-209ENST00000497871 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
ATPAF2-209ENST00000497871 INE1O15225 51 aa2.99□□□□□ -1.93
ATPAF2-209ENST00000497871 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
ATPAF2-209ENST00000497871 PRM1P04553 51 aa2.69□□□□□ -1.98
ATPAF2-209ENST00000497871 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 131.1 ms