RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 A0A1B0GU33 70 aa7.36□□□□□ -1.23
CLIC4-204ENST00000497755 H7BZZ5 65 aa7.36□□□□□ -1.23
CLIC4-204ENST00000497755 COA5Q86WW8 74 aa7.33□□□□□ -1.24
CLIC4-204ENST00000497755 KRTAP20-2Q3LI61 65 aa7.32□□□□□ -1.24
CLIC4-204ENST00000497755 KRTAP4-7Q9BYR0 210 aa7.32□□□□□ -1.24
CLIC4-204ENST00000497755 SPRR5A0A1B0GTR4 108 aa7.22□□□□□ -1.25
CLIC4-204ENST00000497755 TNP1P09430 55 aa7.22□□□□□ -1.25
CLIC4-204ENST00000497755 KRTAP5-5Q701N2 237 aaPredicted RBP7.2□□□□□ -1.26
CLIC4-204ENST00000497755 ATP5EP56381 51 aaPredicted RBP7.13□□□□□ -1.27
CLIC4-204ENST00000497755 SMIM26A0A096LP01 95 aa7.12□□□□□ -1.27
CLIC4-204ENST00000497755 A8MU10 97 aa7.12□□□□□ -1.27
CLIC4-204ENST00000497755 TMEM258P61165 79 aa7.12□□□□□ -1.27
CLIC4-204ENST00000497755 PCP4P48539 62 aa7.11□□□□□ -1.27
CLIC4-204ENST00000497755 KRTAP12-4P60329 112 aa7.11□□□□□ -1.27
CLIC4-204ENST00000497755 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
CLIC4-204ENST00000497755 SYNE1Q8NF91 8797 aaKnown RBP7.07□□□□□ -1.28
CLIC4-204ENST00000497755 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
CLIC4-204ENST00000497755 A0A1B0GU69 56 aa6.96□□□□□ -1.3
CLIC4-204ENST00000497755 KRTAP4-11Q9BYQ6 195 aa6.82□□□□□ -1.32
CLIC4-204ENST00000497755 LINC01558Q9Y6Z2 57 aa6.76□□□□□ -1.33
CLIC4-204ENST00000497755 PRR15LQ9BU68 103 aa6.72□□□□□ -1.33
CLIC4-204ENST00000497755 AHNAKQ09666 5890 aaKnown RBP6.71□□□□□ -1.33
CLIC4-204ENST00000497755 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
CLIC4-204ENST00000497755 KRTAP5-2Q701N4 177 aa6.68□□□□□ -1.34
CLIC4-204ENST00000497755 MUC5ACP98088 5654 aa6.65□□□□□ -1.35
CLIC4-204ENST00000497755 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
CLIC4-204ENST00000497755 V9GYY9 64 aa6.64□□□□□ -1.35
CLIC4-204ENST00000497755 Q1T7F1 81 aa6.63□□□□□ -1.35
CLIC4-204ENST00000497755 MUC5BQ9HC84 5762 aaPredicted RBP6.63□□□□□ -1.35
CLIC4-204ENST00000497755 KRTAP5-8O75690 187 aa6.61□□□□□ -1.35
CLIC4-204ENST00000497755 PSPHP1O15172 72 aa6.57□□□□□ -1.36
CLIC4-204ENST00000497755 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
CLIC4-204ENST00000497755 KRTAP6-1Q3LI64 71 aa6.54□□□□□ -1.36
CLIC4-204ENST00000497755 MT1AP04731 61 aa6.52□□□□□ -1.37
CLIC4-204ENST00000497755 UQCR11O14957 56 aa6.51□□□□□ -1.37
CLIC4-204ENST00000497755 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
CLIC4-204ENST00000497755 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
CLIC4-204ENST00000497755 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
CLIC4-204ENST00000497755 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
CLIC4-204ENST00000497755 KRTAP9-4Q9BYQ2 154 aa6.38□□□□□ -1.39
CLIC4-204ENST00000497755 A6NED7 52 aa6.36□□□□□ -1.39
CLIC4-204ENST00000497755 KRTAP6-2Q3LI66 62 aa6.35□□□□□ -1.39
CLIC4-204ENST00000497755 KRTAP9-9Q9BYP9 154 aa6.33□□□□□ -1.4
CLIC4-204ENST00000497755 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
CLIC4-204ENST00000497755 K7ERS5 55 aa6.2□□□□□ -1.42
CLIC4-204ENST00000497755 KRTAP9-6A8MVA2 160 aa6.18□□□□□ -1.42
CLIC4-204ENST00000497755 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
CLIC4-204ENST00000497755 H3BS24 57 aa6.1□□□□□ -1.43
CLIC4-204ENST00000497755 KRTAP5-1Q6L8H4 278 aa6.1□□□□□ -1.43
CLIC4-204ENST00000497755 MT3P25713 68 aa5.99□□□□□ -1.45
CLIC4-204ENST00000497755 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
CLIC4-204ENST00000497755 ROMO1P60602 79 aa5.88□□□□□ -1.47
CLIC4-204ENST00000497755 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
CLIC4-204ENST00000497755 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
CLIC4-204ENST00000497755 LCE1EQ5T753 118 aa5.64□□□□□ -1.51
CLIC4-204ENST00000497755 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
CLIC4-204ENST00000497755 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
CLIC4-204ENST00000497755 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
CLIC4-204ENST00000497755 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
CLIC4-204ENST00000497755 KTN1-AS1Q86SY8 53 aa5.25□□□□□ -1.57
CLIC4-204ENST00000497755 LCE1CQ5T751 118 aa5.24□□□□□ -1.57
CLIC4-204ENST00000497755 SVIPQ8NHG7 77 aa5□□□□□ -1.61
CLIC4-204ENST00000497755 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
CLIC4-204ENST00000497755 LCE1FQ5T754 118 aa4.77□□□□□ -1.65
CLIC4-204ENST00000497755 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
CLIC4-204ENST00000497755 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
CLIC4-204ENST00000497755 PHGR1C9JFL3 82 aa4.55□□□□□ -1.68
CLIC4-204ENST00000497755 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
CLIC4-204ENST00000497755 KRTAP21-2Q3LI59 83 aa4.33□□□□□ -1.72
CLIC4-204ENST00000497755 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
CLIC4-204ENST00000497755 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
CLIC4-204ENST00000497755 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
CLIC4-204ENST00000497755 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
CLIC4-204ENST00000497755 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
CLIC4-204ENST00000497755 KRTAP21-1Q3LI58 79 aa3.45□□□□□ -1.86
CLIC4-204ENST00000497755 INE1O15225 51 aa3.28□□□□□ -1.88
CLIC4-204ENST00000497755 PRM1P04553 51 aa3.04□□□□□ -1.92
CLIC4-204ENST00000497755 MUC16Q8WXI7 14507 aa2.79□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms