RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 A0A1B0GU69 56 aa3.93□□□□□ -1.78
PTPN3-206ENST00000497739 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
PTPN3-206ENST00000497739 A0A1B0GU33 70 aa3.92□□□□□ -1.78
PTPN3-206ENST00000497739 CCDC179H3BU77 68 aa3.92□□□□□ -1.78
PTPN3-206ENST00000497739 A0A0D9SG42 100 aa3.9□□□□□ -1.79
PTPN3-206ENST00000497739 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
PTPN3-206ENST00000497739 SPRR2DP22532 72 aa3.89□□□□□ -1.79
PTPN3-206ENST00000497739 KRTAP8-1Q8IUC2 63 aa3.88□□□□□ -1.79
PTPN3-206ENST00000497739 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
PTPN3-206ENST00000497739 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
PTPN3-206ENST00000497739 TMEM258P61165 79 aa3.86□□□□□ -1.79
PTPN3-206ENST00000497739 SPATA8Q6RVD6 105 aa3.86□□□□□ -1.79
PTPN3-206ENST00000497739 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
PTPN3-206ENST00000497739 PSPHP1O15172 72 aa3.83□□□□□ -1.8
PTPN3-206ENST00000497739 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
PTPN3-206ENST00000497739 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
PTPN3-206ENST00000497739 A8MU10 97 aa3.74□□□□□ -1.81
PTPN3-206ENST00000497739 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
PTPN3-206ENST00000497739 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
PTPN3-206ENST00000497739 UQCR11O14957 56 aa3.72□□□□□ -1.81
PTPN3-206ENST00000497739 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
PTPN3-206ENST00000497739 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
PTPN3-206ENST00000497739 K7ERS5 55 aa3.66□□□□□ -1.82
PTPN3-206ENST00000497739 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
PTPN3-206ENST00000497739 TNP1P09430 55 aa3.63□□□□□ -1.83
PTPN3-206ENST00000497739 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
PTPN3-206ENST00000497739 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
PTPN3-206ENST00000497739 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
PTPN3-206ENST00000497739 Q1T7F1 81 aa3.57□□□□□ -1.84
PTPN3-206ENST00000497739 A6NED7 52 aa3.54□□□□□ -1.84
PTPN3-206ENST00000497739 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
PTPN3-206ENST00000497739 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
PTPN3-206ENST00000497739 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
PTPN3-206ENST00000497739 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
PTPN3-206ENST00000497739 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
PTPN3-206ENST00000497739 MT1EP04732 61 aa3.49□□□□□ -1.85
PTPN3-206ENST00000497739 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
PTPN3-206ENST00000497739 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
PTPN3-206ENST00000497739 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
PTPN3-206ENST00000497739 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
PTPN3-206ENST00000497739 MT4P47944 62 aa3.43□□□□□ -1.86
PTPN3-206ENST00000497739 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
PTPN3-206ENST00000497739 MT1GP13640 62 aa3.42□□□□□ -1.86
PTPN3-206ENST00000497739 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
PTPN3-206ENST00000497739 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
PTPN3-206ENST00000497739 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
PTPN3-206ENST00000497739 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
PTPN3-206ENST00000497739 MT1LQ93083 61 aa3.36□□□□□ -1.87
PTPN3-206ENST00000497739 MT1MQ8N339 61 aa3.33□□□□□ -1.88
PTPN3-206ENST00000497739 ROMO1P60602 79 aa3.31□□□□□ -1.88
PTPN3-206ENST00000497739 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
PTPN3-206ENST00000497739 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
PTPN3-206ENST00000497739 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
PTPN3-206ENST00000497739 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
PTPN3-206ENST00000497739 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
PTPN3-206ENST00000497739 PMAIP1Q13794 54 aa3.13□□□□□ -1.91
PTPN3-206ENST00000497739 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
PTPN3-206ENST00000497739 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
PTPN3-206ENST00000497739 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
PTPN3-206ENST00000497739 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
PTPN3-206ENST00000497739 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
PTPN3-206ENST00000497739 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
PTPN3-206ENST00000497739 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
PTPN3-206ENST00000497739 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
PTPN3-206ENST00000497739 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
PTPN3-206ENST00000497739 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
PTPN3-206ENST00000497739 MT1AP04731 61 aa2.88□□□□□ -1.95
PTPN3-206ENST00000497739 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
PTPN3-206ENST00000497739 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
PTPN3-206ENST00000497739 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
PTPN3-206ENST00000497739 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
PTPN3-206ENST00000497739 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
PTPN3-206ENST00000497739 INE1O15225 51 aa2.15□□□□□ -2.07
PTPN3-206ENST00000497739 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
PTPN3-206ENST00000497739 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
PTPN3-206ENST00000497739 PRM1P04553 51 aa1.68□□□□□ -2.14
PTPN3-206ENST00000497739 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
PTPN3-206ENST00000497739 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 50 ms