RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 KRTAP19-3Q7Z4W3 81 aa7.11□□□□□ -1.27
SCAMP3-209ENST00000497470 MT1GP13640 62 aa7.07□□□□□ -1.28
SCAMP3-209ENST00000497470 LCE5AQ5TCM9 118 aa7.07□□□□□ -1.28
SCAMP3-209ENST00000497470 MT1LQ93083 61 aa7.06□□□□□ -1.28
SCAMP3-209ENST00000497470 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
SCAMP3-209ENST00000497470 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
SCAMP3-209ENST00000497470 NEBP20929 6669 aa6.95□□□□□ -1.3
SCAMP3-209ENST00000497470 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
SCAMP3-209ENST00000497470 KTN1-AS1Q86SY8 53 aa6.94□□□□□ -1.3
SCAMP3-209ENST00000497470 SPRR2DP22532 72 aa6.92□□□□□ -1.3
SCAMP3-209ENST00000497470 MT1MQ8N339 61 aa6.87□□□□□ -1.31
SCAMP3-209ENST00000497470 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
SCAMP3-209ENST00000497470 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
SCAMP3-209ENST00000497470 PRAC1Q96KF2 57 aa6.81□□□□□ -1.32
SCAMP3-209ENST00000497470 KRTAP20-1Q3LI63 56 aa6.76□□□□□ -1.33
SCAMP3-209ENST00000497470 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
SCAMP3-209ENST00000497470 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
SCAMP3-209ENST00000497470 KRTAP2-2Q9BYT5 123 aa6.65□□□□□ -1.34
SCAMP3-209ENST00000497470 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.34
SCAMP3-209ENST00000497470 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
SCAMP3-209ENST00000497470 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
SCAMP3-209ENST00000497470 DSTQ03001 7570 aaKnown RBP6.43□□□□□ -1.38
SCAMP3-209ENST00000497470 SVIPQ8NHG7 77 aa6.42□□□□□ -1.38
SCAMP3-209ENST00000497470 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
SCAMP3-209ENST00000497470 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
SCAMP3-209ENST00000497470 LCE4AQ5TA78 99 aa6.28□□□□□ -1.4
SCAMP3-209ENST00000497470 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
SCAMP3-209ENST00000497470 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
SCAMP3-209ENST00000497470 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
SCAMP3-209ENST00000497470 MT1AP04731 61 aa6.05□□□□□ -1.44
SCAMP3-209ENST00000497470 KRTAP12-4P60329 112 aa5.99□□□□□ -1.45
SCAMP3-209ENST00000497470 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
SCAMP3-209ENST00000497470 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
SCAMP3-209ENST00000497470 MT4P47944 62 aa5.93□□□□□ -1.46
SCAMP3-209ENST00000497470 KRTAP6-1Q3LI64 71 aa5.89□□□□□ -1.47
SCAMP3-209ENST00000497470 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
SCAMP3-209ENST00000497470 KRTAP20-2Q3LI61 65 aa5.81□□□□□ -1.48
SCAMP3-209ENST00000497470 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
SCAMP3-209ENST00000497470 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
SCAMP3-209ENST00000497470 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
SCAMP3-209ENST00000497470 HMCN1Q96RW7 5635 aa5.72□□□□□ -1.49
SCAMP3-209ENST00000497470 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
SCAMP3-209ENST00000497470 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
SCAMP3-209ENST00000497470 MT3P25713 68 aa5.53□□□□□ -1.52
SCAMP3-209ENST00000497470 KRTAP6-2Q3LI66 62 aa5.51□□□□□ -1.53
SCAMP3-209ENST00000497470 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
SCAMP3-209ENST00000497470 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
SCAMP3-209ENST00000497470 NDUFAF8A1L188 74 aa5.19□□□□□ -1.58
SCAMP3-209ENST00000497470 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
SCAMP3-209ENST00000497470 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
SCAMP3-209ENST00000497470 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
SCAMP3-209ENST00000497470 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
SCAMP3-209ENST00000497470 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
SCAMP3-209ENST00000497470 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
SCAMP3-209ENST00000497470 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
SCAMP3-209ENST00000497470 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
SCAMP3-209ENST00000497470 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
SCAMP3-209ENST00000497470 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
SCAMP3-209ENST00000497470 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
SCAMP3-209ENST00000497470 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
SCAMP3-209ENST00000497470 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
SCAMP3-209ENST00000497470 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
SCAMP3-209ENST00000497470 H3BS24 57 aa4.51□□□□□ -1.69
SCAMP3-209ENST00000497470 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
SCAMP3-209ENST00000497470 INE1O15225 51 aa4.46□□□□□ -1.7
SCAMP3-209ENST00000497470 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
SCAMP3-209ENST00000497470 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
SCAMP3-209ENST00000497470 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
SCAMP3-209ENST00000497470 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
SCAMP3-209ENST00000497470 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
SCAMP3-209ENST00000497470 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
SCAMP3-209ENST00000497470 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
SCAMP3-209ENST00000497470 PRM1P04553 51 aa3.87□□□□□ -1.79
SCAMP3-209ENST00000497470 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
SCAMP3-209ENST00000497470 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
SCAMP3-209ENST00000497470 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
SCAMP3-209ENST00000497470 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SCAMP3-209ENST00000497470 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 244 ms