RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
HLA-B-254ENST00000497377 SPRR2EP22531 72 aa4.45□□□□□ -1.7
HLA-B-254ENST00000497377 SPRR2BP35325 72 aa4.45□□□□□ -1.7
HLA-B-254ENST00000497377 SPRR2AP35326 72 aa4.45□□□□□ -1.7
HLA-B-254ENST00000497377 UQCR11O14957 56 aa4.42□□□□□ -1.7
HLA-B-254ENST00000497377 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
HLA-B-254ENST00000497377 V9GYY9 64 aa4.4□□□□□ -1.71
HLA-B-254ENST00000497377 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
HLA-B-254ENST00000497377 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
HLA-B-254ENST00000497377 Q1T7F1 81 aa4.34□□□□□ -1.71
HLA-B-254ENST00000497377 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
HLA-B-254ENST00000497377 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
HLA-B-254ENST00000497377 TNP1P09430 55 aa4.31□□□□□ -1.72
HLA-B-254ENST00000497377 SPRR2DP22532 72 aa4.31□□□□□ -1.72
HLA-B-254ENST00000497377 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
HLA-B-254ENST00000497377 PSPHP1O15172 72 aa4.28□□□□□ -1.72
HLA-B-254ENST00000497377 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
HLA-B-254ENST00000497377 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
HLA-B-254ENST00000497377 K7ERS5 55 aa4.25□□□□□ -1.73
HLA-B-254ENST00000497377 MT1EP04732 61 aa4.25□□□□□ -1.73
HLA-B-254ENST00000497377 RPS28P62857 69 aaKnown RBP4.25□□□□□ -1.73
HLA-B-254ENST00000497377 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
HLA-B-254ENST00000497377 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
HLA-B-254ENST00000497377 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
HLA-B-254ENST00000497377 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
HLA-B-254ENST00000497377 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
HLA-B-254ENST00000497377 A6NED7 52 aa4.18□□□□□ -1.74
HLA-B-254ENST00000497377 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
HLA-B-254ENST00000497377 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
HLA-B-254ENST00000497377 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
HLA-B-254ENST00000497377 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
HLA-B-254ENST00000497377 MT1GP13640 62 aa4.13□□□□□ -1.75
HLA-B-254ENST00000497377 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
HLA-B-254ENST00000497377 MT1LQ93083 61 aa4.09□□□□□ -1.75
HLA-B-254ENST00000497377 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
HLA-B-254ENST00000497377 MT1MQ8N339 61 aa4.03□□□□□ -1.76
HLA-B-254ENST00000497377 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
HLA-B-254ENST00000497377 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
HLA-B-254ENST00000497377 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
HLA-B-254ENST00000497377 ROMO1P60602 79 aa3.96□□□□□ -1.78
HLA-B-254ENST00000497377 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
HLA-B-254ENST00000497377 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
HLA-B-254ENST00000497377 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
HLA-B-254ENST00000497377 MT4P47944 62 aa3.73□□□□□ -1.81
HLA-B-254ENST00000497377 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
HLA-B-254ENST00000497377 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
HLA-B-254ENST00000497377 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
HLA-B-254ENST00000497377 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
HLA-B-254ENST00000497377 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
HLA-B-254ENST00000497377 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
HLA-B-254ENST00000497377 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
HLA-B-254ENST00000497377 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
HLA-B-254ENST00000497377 PMAIP1Q13794 54 aa3.52□□□□□ -1.85
HLA-B-254ENST00000497377 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
HLA-B-254ENST00000497377 MT1AP04731 61 aa3.49□□□□□ -1.85
HLA-B-254ENST00000497377 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
HLA-B-254ENST00000497377 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
HLA-B-254ENST00000497377 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
HLA-B-254ENST00000497377 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
HLA-B-254ENST00000497377 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
HLA-B-254ENST00000497377 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
HLA-B-254ENST00000497377 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
HLA-B-254ENST00000497377 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
HLA-B-254ENST00000497377 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
HLA-B-254ENST00000497377 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
HLA-B-254ENST00000497377 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
HLA-B-254ENST00000497377 LUZP6Q538Z0 58 aa2.86□□□□□ -1.95
HLA-B-254ENST00000497377 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
HLA-B-254ENST00000497377 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
HLA-B-254ENST00000497377 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
HLA-B-254ENST00000497377 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
HLA-B-254ENST00000497377 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
HLA-B-254ENST00000497377 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
HLA-B-254ENST00000497377 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
HLA-B-254ENST00000497377 PRM1P04553 51 aa2.01□□□□□ -2.09
HLA-B-254ENST00000497377 INE1O15225 51 aa1.96□□□□□ -2.1
HLA-B-254ENST00000497377 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
HLA-B-254ENST00000497377 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 216.9 ms