RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
COL1A2-212ENST00000497316 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
COL1A2-212ENST00000497316 V9GYY9 64 aa6.01□□□□□ -1.45
COL1A2-212ENST00000497316 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
COL1A2-212ENST00000497316 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
COL1A2-212ENST00000497316 MT1EP04732 61 aa5.97□□□□□ -1.45
COL1A2-212ENST00000497316 TNP1P09430 55 aa5.97□□□□□ -1.45
COL1A2-212ENST00000497316 Q1T7F1 81 aa5.97□□□□□ -1.45
COL1A2-212ENST00000497316 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
COL1A2-212ENST00000497316 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
COL1A2-212ENST00000497316 PSPHP1O15172 72 aa5.89□□□□□ -1.47
COL1A2-212ENST00000497316 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
COL1A2-212ENST00000497316 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
COL1A2-212ENST00000497316 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
COL1A2-212ENST00000497316 K7ERS5 55 aa5.82□□□□□ -1.48
COL1A2-212ENST00000497316 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
COL1A2-212ENST00000497316 MT1GP13640 62 aa5.8□□□□□ -1.48
COL1A2-212ENST00000497316 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
COL1A2-212ENST00000497316 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
COL1A2-212ENST00000497316 KRTAP25-1Q3LHN0 102 aa5.73□□□□□ -1.49
COL1A2-212ENST00000497316 MT1LQ93083 61 aa5.73□□□□□ -1.49
COL1A2-212ENST00000497316 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
COL1A2-212ENST00000497316 A6NED7 52 aa5.72□□□□□ -1.49
COL1A2-212ENST00000497316 MT1MQ8N339 61 aa5.67□□□□□ -1.5
COL1A2-212ENST00000497316 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
COL1A2-212ENST00000497316 KRTAP12-3P60328 96 aa5.65□□□□□ -1.5
COL1A2-212ENST00000497316 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
COL1A2-212ENST00000497316 GPR98Q8WXG9 6306 aa5.63□□□□□ -1.51
COL1A2-212ENST00000497316 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
COL1A2-212ENST00000497316 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
COL1A2-212ENST00000497316 ROMO1P60602 79 aa5.45□□□□□ -1.54
COL1A2-212ENST00000497316 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
COL1A2-212ENST00000497316 MT4P47944 62 aa5.42□□□□□ -1.54
COL1A2-212ENST00000497316 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
COL1A2-212ENST00000497316 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
COL1A2-212ENST00000497316 AHNAK2Q8IVF2 5795 aa5.23□□□□□ -1.57
COL1A2-212ENST00000497316 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
COL1A2-212ENST00000497316 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
COL1A2-212ENST00000497316 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
COL1A2-212ENST00000497316 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
COL1A2-212ENST00000497316 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
COL1A2-212ENST00000497316 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
COL1A2-212ENST00000497316 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
COL1A2-212ENST00000497316 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
COL1A2-212ENST00000497316 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
COL1A2-212ENST00000497316 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
COL1A2-212ENST00000497316 PMAIP1Q13794 54 aa4.94□□□□□ -1.62
COL1A2-212ENST00000497316 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
COL1A2-212ENST00000497316 MT1AP04731 61 aa4.9□□□□□ -1.63
COL1A2-212ENST00000497316 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
COL1A2-212ENST00000497316 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
COL1A2-212ENST00000497316 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
COL1A2-212ENST00000497316 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
COL1A2-212ENST00000497316 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
COL1A2-212ENST00000497316 MT3P25713 68 aa4.48□□□□□ -1.69
COL1A2-212ENST00000497316 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
COL1A2-212ENST00000497316 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
COL1A2-212ENST00000497316 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
COL1A2-212ENST00000497316 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
COL1A2-212ENST00000497316 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
COL1A2-212ENST00000497316 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
COL1A2-212ENST00000497316 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
COL1A2-212ENST00000497316 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
COL1A2-212ENST00000497316 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
COL1A2-212ENST00000497316 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
COL1A2-212ENST00000497316 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
COL1A2-212ENST00000497316 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
COL1A2-212ENST00000497316 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
COL1A2-212ENST00000497316 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
COL1A2-212ENST00000497316 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
COL1A2-212ENST00000497316 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
COL1A2-212ENST00000497316 INE1O15225 51 aa3.33□□□□□ -1.88
COL1A2-212ENST00000497316 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
COL1A2-212ENST00000497316 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
COL1A2-212ENST00000497316 PRM1P04553 51 aa2.77□□□□□ -1.97
COL1A2-212ENST00000497316 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
COL1A2-212ENST00000497316 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
COL1A2-212ENST00000497316 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 695.1 ms