RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 LINC01558Q9Y6Z2 57 aa6.08□□□□□ -1.44
TRAPPC3-207ENST00000497251 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
TRAPPC3-207ENST00000497251 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
TRAPPC3-207ENST00000497251 MT1MQ8N339 61 aa6□□□□□ -1.45
TRAPPC3-207ENST00000497251 MT4P47944 62 aa5.99□□□□□ -1.45
TRAPPC3-207ENST00000497251 MT1LQ93083 61 aa5.96□□□□□ -1.46
TRAPPC3-207ENST00000497251 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
TRAPPC3-207ENST00000497251 AHNAK2Q8IVF2 5795 aa5.94□□□□□ -1.46
TRAPPC3-207ENST00000497251 UQCR11O14957 56 aa5.93□□□□□ -1.46
TRAPPC3-207ENST00000497251 TNP1P09430 55 aa5.92□□□□□ -1.46
TRAPPC3-207ENST00000497251 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
TRAPPC3-207ENST00000497251 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
TRAPPC3-207ENST00000497251 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
TRAPPC3-207ENST00000497251 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
TRAPPC3-207ENST00000497251 V9GYY9 64 aa5.79□□□□□ -1.48
TRAPPC3-207ENST00000497251 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
TRAPPC3-207ENST00000497251 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
TRAPPC3-207ENST00000497251 Q1T7F1 81 aa5.73□□□□□ -1.49
TRAPPC3-207ENST00000497251 KRTAP5-7Q6L8G8 165 aa5.72□□□□□ -1.49
TRAPPC3-207ENST00000497251 K7ERS5 55 aa5.69□□□□□ -1.5
TRAPPC3-207ENST00000497251 PSPHP1O15172 72 aa5.69□□□□□ -1.5
TRAPPC3-207ENST00000497251 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
TRAPPC3-207ENST00000497251 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
TRAPPC3-207ENST00000497251 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
TRAPPC3-207ENST00000497251 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
TRAPPC3-207ENST00000497251 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
TRAPPC3-207ENST00000497251 KRTAP20-2Q3LI61 65 aa5.59□□□□□ -1.51
TRAPPC3-207ENST00000497251 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
TRAPPC3-207ENST00000497251 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC3-207ENST00000497251 A6NED7 52 aa5.52□□□□□ -1.53
TRAPPC3-207ENST00000497251 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
TRAPPC3-207ENST00000497251 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
TRAPPC3-207ENST00000497251 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
TRAPPC3-207ENST00000497251 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
TRAPPC3-207ENST00000497251 PCP4P48539 62 aa5.44□□□□□ -1.54
TRAPPC3-207ENST00000497251 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
TRAPPC3-207ENST00000497251 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
TRAPPC3-207ENST00000497251 H3BS24 57 aa5.32□□□□□ -1.56
TRAPPC3-207ENST00000497251 ROMO1P60602 79 aa5.3□□□□□ -1.56
TRAPPC3-207ENST00000497251 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
TRAPPC3-207ENST00000497251 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
TRAPPC3-207ENST00000497251 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
TRAPPC3-207ENST00000497251 MT1AP04731 61 aa5.09□□□□□ -1.59
TRAPPC3-207ENST00000497251 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
TRAPPC3-207ENST00000497251 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
TRAPPC3-207ENST00000497251 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
TRAPPC3-207ENST00000497251 MUC5ACP98088 5654 aa4.96□□□□□ -1.61
TRAPPC3-207ENST00000497251 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
TRAPPC3-207ENST00000497251 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
TRAPPC3-207ENST00000497251 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
TRAPPC3-207ENST00000497251 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
TRAPPC3-207ENST00000497251 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
TRAPPC3-207ENST00000497251 MT3P25713 68 aa4.71□□□□□ -1.66
TRAPPC3-207ENST00000497251 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.67
TRAPPC3-207ENST00000497251 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
TRAPPC3-207ENST00000497251 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
TRAPPC3-207ENST00000497251 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
TRAPPC3-207ENST00000497251 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
TRAPPC3-207ENST00000497251 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
TRAPPC3-207ENST00000497251 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
TRAPPC3-207ENST00000497251 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
TRAPPC3-207ENST00000497251 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
TRAPPC3-207ENST00000497251 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
TRAPPC3-207ENST00000497251 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
TRAPPC3-207ENST00000497251 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC3-207ENST00000497251 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
TRAPPC3-207ENST00000497251 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
TRAPPC3-207ENST00000497251 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
TRAPPC3-207ENST00000497251 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
TRAPPC3-207ENST00000497251 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
TRAPPC3-207ENST00000497251 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
TRAPPC3-207ENST00000497251 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
TRAPPC3-207ENST00000497251 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
TRAPPC3-207ENST00000497251 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
TRAPPC3-207ENST00000497251 PRM1P04553 51 aa2.69□□□□□ -1.98
TRAPPC3-207ENST00000497251 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
TRAPPC3-207ENST00000497251 INE1O15225 51 aa2.47□□□□□ -2.01
TRAPPC3-207ENST00000497251 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 238.6 ms