RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
PMF1-205ENST00000497069 KRTAP20-1Q3LI63 56 aa5.7□□□□□ -1.5
PMF1-205ENST00000497069 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
PMF1-205ENST00000497069 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
PMF1-205ENST00000497069 MT1LQ93083 61 aa5.66□□□□□ -1.5
PMF1-205ENST00000497069 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
PMF1-205ENST00000497069 MT1GP13640 62 aa5.65□□□□□ -1.5
PMF1-205ENST00000497069 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
PMF1-205ENST00000497069 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
PMF1-205ENST00000497069 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
PMF1-205ENST00000497069 MT1MQ8N339 61 aa5.54□□□□□ -1.52
PMF1-205ENST00000497069 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
PMF1-205ENST00000497069 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
PMF1-205ENST00000497069 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
PMF1-205ENST00000497069 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
PMF1-205ENST00000497069 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
PMF1-205ENST00000497069 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
PMF1-205ENST00000497069 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
PMF1-205ENST00000497069 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
PMF1-205ENST00000497069 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
PMF1-205ENST00000497069 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
PMF1-205ENST00000497069 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
PMF1-205ENST00000497069 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
PMF1-205ENST00000497069 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
PMF1-205ENST00000497069 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
PMF1-205ENST00000497069 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
PMF1-205ENST00000497069 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
PMF1-205ENST00000497069 MT4P47944 62 aa4.99□□□□□ -1.61
PMF1-205ENST00000497069 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
PMF1-205ENST00000497069 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
PMF1-205ENST00000497069 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
PMF1-205ENST00000497069 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
PMF1-205ENST00000497069 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
PMF1-205ENST00000497069 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
PMF1-205ENST00000497069 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
PMF1-205ENST00000497069 MT1AP04731 61 aa4.83□□□□□ -1.64
PMF1-205ENST00000497069 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
PMF1-205ENST00000497069 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
PMF1-205ENST00000497069 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
PMF1-205ENST00000497069 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
PMF1-205ENST00000497069 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
PMF1-205ENST00000497069 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
PMF1-205ENST00000497069 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
PMF1-205ENST00000497069 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
PMF1-205ENST00000497069 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
PMF1-205ENST00000497069 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
PMF1-205ENST00000497069 MT3P25713 68 aa4.42□□□□□ -1.7
PMF1-205ENST00000497069 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
PMF1-205ENST00000497069 H3BS24 57 aa4.24□□□□□ -1.73
PMF1-205ENST00000497069 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
PMF1-205ENST00000497069 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
PMF1-205ENST00000497069 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
PMF1-205ENST00000497069 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
PMF1-205ENST00000497069 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
PMF1-205ENST00000497069 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
PMF1-205ENST00000497069 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
PMF1-205ENST00000497069 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
PMF1-205ENST00000497069 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
PMF1-205ENST00000497069 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
PMF1-205ENST00000497069 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
PMF1-205ENST00000497069 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
PMF1-205ENST00000497069 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
PMF1-205ENST00000497069 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
PMF1-205ENST00000497069 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
PMF1-205ENST00000497069 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
PMF1-205ENST00000497069 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
PMF1-205ENST00000497069 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
PMF1-205ENST00000497069 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
PMF1-205ENST00000497069 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
PMF1-205ENST00000497069 INE1O15225 51 aa3.24□□□□□ -1.89
PMF1-205ENST00000497069 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
PMF1-205ENST00000497069 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
PMF1-205ENST00000497069 PRM1P04553 51 aa3.04□□□□□ -1.92
PMF1-205ENST00000497069 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
PMF1-205ENST00000497069 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
PMF1-205ENST00000497069 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
PMF1-205ENST00000497069 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
PMF1-205ENST00000497069 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 85.9 ms