RNA–Protein interactions for RNA: ENST00000497065.1

SPEG-223, Transcript of SPEG complex locus, human

TSL 4

Gene SPEG, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPEG-223	ENST00000497065	MT1L	Q93083	61 aa		6.45	□□□□□ -1.38
SPEG-223	ENST00000497065	PP632	Q6XCG6	107 aa		6.44	□□□□□ -1.38
SPEG-223	ENST00000497065	MT1M	Q8N339	61 aa		6.43	□□□□□ -1.38
SPEG-223	ENST00000497065	KRTAP4-9	Q9BYQ8	210 aa		6.43	□□□□□ -1.38
SPEG-223	ENST00000497065	SVIP	Q8NHG7	77 aa		6.4	□□□□□ -1.38
SPEG-223	ENST00000497065	UQCR11	O14957	56 aa		6.39	□□□□□ -1.39
SPEG-223	ENST00000497065	KRTAP4-3	Q9BYR4	195 aa		6.36	□□□□□ -1.39
SPEG-223	ENST00000497065		A6NED7	52 aa		6.33	□□□□□ -1.4
SPEG-223	ENST00000497065	MIR22HG	Q0VDD5	57 aa		6.29	□□□□□ -1.4
SPEG-223	ENST00000497065	GPR98	Q8WXG9	6306 aa		6.26	□□□□□ -1.41
SPEG-223	ENST00000497065	KRTAP12-3	P60328	96 aa		6.24	□□□□□ -1.41
SPEG-223	ENST00000497065	LCE1D	Q5T752	114 aa		6.24	□□□□□ -1.41
SPEG-223	ENST00000497065	MT4	P47944	62 aa		6.22	□□□□□ -1.41
SPEG-223	ENST00000497065	KRTAP4-7	Q9BYR0	210 aa		6.2	□□□□□ -1.42
SPEG-223	ENST00000497065	CDC42SE1	Q9NRR8	79 aa		6.2	□□□□□ -1.42
SPEG-223	ENST00000497065	LCE4A	Q5TA78	99 aa		6.17	□□□□□ -1.42
SPEG-223	ENST00000497065		K7ERS5	55 aa		6.13	□□□□□ -1.43
SPEG-223	ENST00000497065	KRTAP25-1	Q3LHN0	102 aa		6.12	□□□□□ -1.43
SPEG-223	ENST00000497065	BRK1	Q8WUW1	75 aa		6.11	□□□□□ -1.43
SPEG-223	ENST00000497065	HMCN1	Q96RW7	5635 aa		6.1	□□□□□ -1.43
SPEG-223	ENST00000497065	KRTAP5-4	Q6L8H1	288 aa		6.06	□□□□□ -1.44
SPEG-223	ENST00000497065	KRTAP4-6	Q9BYQ5	205 aa		6.01	□□□□□ -1.45
SPEG-223	ENST00000497065	AHNAK2	Q8IVF2	5795 aa		5.94	□□□□□ -1.46
SPEG-223	ENST00000497065	PRO0628	Q9UI54	55 aa		5.9	□□□□□ -1.46
SPEG-223	ENST00000497065	LOC100996750	A0A140TA64	210 aa		5.87	□□□□□ -1.47
SPEG-223	ENST00000497065	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.85	□□□□□ -1.47
SPEG-223	ENST00000497065	KRTAP15-1	Q3LI76	137 aa		5.82	□□□□□ -1.48
SPEG-223	ENST00000497065	KRTAP23-1	A1A580	65 aa		5.79	□□□□□ -1.48
SPEG-223	ENST00000497065	PMAIP1	Q13794	54 aa		5.78	□□□□□ -1.48
SPEG-223	ENST00000497065	ROMO1	P60602	79 aa		5.77	□□□□□ -1.49
SPEG-223	ENST00000497065	KRTAP20-2	Q3LI61	65 aa		5.76	□□□□□ -1.49
SPEG-223	ENST00000497065	KRTAP5-10	Q6L8G5	202 aa		5.75	□□□□□ -1.49
SPEG-223	ENST00000497065	LCE3C	Q5T5A8	94 aa		5.73	□□□□□ -1.49
SPEG-223	ENST00000497065	KRTAP12-4	P60329	112 aa		5.7	□□□□□ -1.5
SPEG-223	ENST00000497065	KRTAP19-4	Q3LI73	84 aa		5.69	□□□□□ -1.5
SPEG-223	ENST00000497065	SPRR5	A0A1B0GTR4	108 aa		5.68	□□□□□ -1.5
SPEG-223	ENST00000497065	KRTAP5-3	Q6L8H2	238 aa		5.64	□□□□□ -1.51
SPEG-223	ENST00000497065	SYNE1	Q8NF91	8797 aa	Known RBP	5.63	□□□□□ -1.51
SPEG-223	ENST00000497065	KRTAP5-7	Q6L8G8	165 aa		5.51	□□□□□ -1.53
SPEG-223	ENST00000497065	KTN1-AS1	Q86SY8	53 aa		5.49	□□□□□ -1.53
SPEG-223	ENST00000497065	MT1A	P04731	61 aa		5.48	□□□□□ -1.53
SPEG-223	ENST00000497065	KRTAP6-1	Q3LI64	71 aa		5.47	□□□□□ -1.53
SPEG-223	ENST00000497065	KRTAP9-6	A8MVA2	160 aa		5.45	□□□□□ -1.54
SPEG-223	ENST00000497065	PRAC1	Q96KF2	57 aa		5.43	□□□□□ -1.54
SPEG-223	ENST00000497065	KRTAP5-2	Q701N4	177 aa		5.32	□□□□□ -1.56
SPEG-223	ENST00000497065	KRTAP9-4	Q9BYQ2	154 aa		5.27	□□□□□ -1.57
SPEG-223	ENST00000497065	KRTAP4-11	Q9BYQ6	195 aa		5.25	□□□□□ -1.57
SPEG-223	ENST00000497065	KRTAP6-2	Q3LI66	62 aa		5.23	□□□□□ -1.57
SPEG-223	ENST00000497065	KRTAP5-8	O75690	187 aa		5.07	□□□□□ -1.6
SPEG-223	ENST00000497065	OBSCN	Q5VST9	7968 aa		5.04	□□□□□ -1.6
SPEG-223	ENST00000497065	MT3	P25713	68 aa		4.98	□□□□□ -1.61
SPEG-223	ENST00000497065	AHNAK	Q09666	5890 aa	Known RBP	4.88	□□□□□ -1.63
SPEG-223	ENST00000497065	MUC5AC	P98088	5654 aa		4.85	□□□□□ -1.63
SPEG-223	ENST00000497065	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.82	□□□□□ -1.64
SPEG-223	ENST00000497065	KRTAP9-9	Q9BYP9	154 aa		4.81	□□□□□ -1.64
SPEG-223	ENST00000497065	KRTAP5-1	Q6L8H4	278 aa		4.77	□□□□□ -1.65
SPEG-223	ENST00000497065		H3BS24	57 aa		4.57	□□□□□ -1.68
SPEG-223	ENST00000497065	LCE1E	Q5T753	118 aa		4.52	□□□□□ -1.69
SPEG-223	ENST00000497065		A0A0A0MQY5	61 aa		4.47	□□□□□ -1.69
SPEG-223	ENST00000497065	LUZP6	Q538Z0	58 aa		4.47	□□□□□ -1.69
SPEG-223	ENST00000497065	LCE1B	Q5T7P3	118 aa		4.4	□□□□□ -1.71
SPEG-223	ENST00000497065	KRTAP4-2	Q9BYR5	136 aa		4.34	□□□□□ -1.71
SPEG-223	ENST00000497065	NDUFAF8	A1L188	74 aa		4.22	□□□□□ -1.73
SPEG-223	ENST00000497065	LCE1C	Q5T751	118 aa		4.21	□□□□□ -1.74
SPEG-223	ENST00000497065	LCE3D	Q9BYE3	92 aa		4.12	□□□□□ -1.75
SPEG-223	ENST00000497065	KRTAP4-12	Q9BQ66	201 aa		4.01	□□□□□ -1.77
SPEG-223	ENST00000497065	LCE3E	Q5T5B0	92 aa		3.88	□□□□□ -1.79
SPEG-223	ENST00000497065	KRTAP5-11	Q6L8G4	156 aa		3.83	□□□□□ -1.8
SPEG-223	ENST00000497065	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.81	□□□□□ -1.8
SPEG-223	ENST00000497065	LCE1F	Q5T754	118 aa		3.66	□□□□□ -1.82
SPEG-223	ENST00000497065	KRTAP21-2	Q3LI59	83 aa		3.57	□□□□□ -1.84
SPEG-223	ENST00000497065	INE1	O15225	51 aa		3.5	□□□□□ -1.85
SPEG-223	ENST00000497065	PHGR1	C9JFL3	82 aa		3.39	□□□□□ -1.87
SPEG-223	ENST00000497065	KRTAP4-4	Q9BYR3	166 aa		3.38	□□□□□ -1.87
SPEG-223	ENST00000497065	MUC19	Q7Z5P9	8384 aa		3.1	□□□□□ -1.91
SPEG-223	ENST00000497065	PRM1	P04553	51 aa		2.98	□□□□□ -1.93
SPEG-223	ENST00000497065	KRTAP21-1	Q3LI58	79 aa		2.53	□□□□□ -2
SPEG-223	ENST00000497065	MUC16	Q8WXI7	14507 aa		2.15	□□□□□ -2.06

Retrieved 78 of 20,778 RNA–protein pairs in 42.9 ms