RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	KRTAP12-3	P60328	96 aa		5.12	□□□□□ -1.59
ATPAF2-208	ENST00000496852	MDN1	Q9NU22	5596 aa		5.08	□□□□□ -1.6
ATPAF2-208	ENST00000496852	NEB	P20929	6669 aa		5.08	□□□□□ -1.6
ATPAF2-208	ENST00000496852	LCE1A	Q5T7P2	110 aa		5.07	□□□□□ -1.6
ATPAF2-208	ENST00000496852	SPRR2E	P22531	72 aa		5.06	□□□□□ -1.6
ATPAF2-208	ENST00000496852	SPRR2B	P35325	72 aa		5.06	□□□□□ -1.6
ATPAF2-208	ENST00000496852	SPRR2A	P35326	72 aa		5.06	□□□□□ -1.6
ATPAF2-208	ENST00000496852	NDUFAF8	A1L188	74 aa		5.03	□□□□□ -1.6
ATPAF2-208	ENST00000496852	KRTAP15-1	Q3LI76	137 aa		5	□□□□□ -1.61
ATPAF2-208	ENST00000496852	KRTAP19-3	Q7Z4W3	81 aa		5	□□□□□ -1.61
ATPAF2-208	ENST00000496852	LOC100996750	A0A140TA64	210 aa		4.99	□□□□□ -1.61
ATPAF2-208	ENST00000496852	MT1L	Q93083	61 aa		4.99	□□□□□ -1.61
ATPAF2-208	ENST00000496852	KRTAP4-6	Q9BYQ5	205 aa		4.99	□□□□□ -1.61
ATPAF2-208	ENST00000496852	LCE5A	Q5TCM9	118 aa		4.96	□□□□□ -1.62
ATPAF2-208	ENST00000496852	MT1G	P13640	62 aa		4.93	□□□□□ -1.62
ATPAF2-208	ENST00000496852	LUZP6	Q538Z0	58 aa		4.91	□□□□□ -1.62
ATPAF2-208	ENST00000496852	SPRR2D	P22532	72 aa		4.88	□□□□□ -1.63
ATPAF2-208	ENST00000496852	MT1M	Q8N339	61 aa		4.86	□□□□□ -1.63
ATPAF2-208	ENST00000496852	KRTAP19-4	Q3LI73	84 aa		4.83	□□□□□ -1.64
ATPAF2-208	ENST00000496852	KRTAP4-7	Q9BYR0	210 aa		4.78	□□□□□ -1.64
ATPAF2-208	ENST00000496852	LCE3C	Q5T5A8	94 aa		4.77	□□□□□ -1.65
ATPAF2-208	ENST00000496852	KRTAP2-3	P0C7H8	128 aa		4.74	□□□□□ -1.65
ATPAF2-208	ENST00000496852	KRTAP4-3	Q9BYR4	195 aa		4.74	□□□□□ -1.65
ATPAF2-208	ENST00000496852	KRTAP2-4	Q9BYR9	128 aa		4.74	□□□□□ -1.65
ATPAF2-208	ENST00000496852	KRTAP20-1	Q3LI63	56 aa		4.73	□□□□□ -1.65
ATPAF2-208	ENST00000496852	LCE3B	Q5TA77	95 aa		4.72	□□□□□ -1.65
ATPAF2-208	ENST00000496852	DST	Q03001	7570 aa	Known RBP	4.71	□□□□□ -1.65
ATPAF2-208	ENST00000496852	KRTAP2-2	Q9BYT5	123 aa		4.61	□□□□□ -1.67
ATPAF2-208	ENST00000496852	KRTAP2-1	Q9BYU5	128 aa		4.61	□□□□□ -1.67
ATPAF2-208	ENST00000496852	SPRR5	A0A1B0GTR4	108 aa		4.51	□□□□□ -1.69
ATPAF2-208	ENST00000496852	KRTAP9-6	A8MVA2	160 aa		4.49	□□□□□ -1.69
ATPAF2-208	ENST00000496852	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.43	□□□□□ -1.7
ATPAF2-208	ENST00000496852	KRTAP5-4	Q6L8H1	288 aa		4.38	□□□□□ -1.71
ATPAF2-208	ENST00000496852	LCE4A	Q5TA78	99 aa		4.35	□□□□□ -1.71
ATPAF2-208	ENST00000496852	KRTAP4-9	Q9BYQ8	210 aa		4.27	□□□□□ -1.73
ATPAF2-208	ENST00000496852	MT1A	P04731	61 aa		4.26	□□□□□ -1.73
ATPAF2-208	ENST00000496852	MT4	P47944	62 aa		4.24	□□□□□ -1.73
ATPAF2-208	ENST00000496852	LCE1D	Q5T752	114 aa		4.23	□□□□□ -1.73
ATPAF2-208	ENST00000496852	INE1	O15225	51 aa		4.22	□□□□□ -1.73
ATPAF2-208	ENST00000496852	KRTAP6-1	Q3LI64	71 aa		4.2	□□□□□ -1.74
ATPAF2-208	ENST00000496852	SYNE1	Q8NF91	8797 aa	Known RBP	4.2	□□□□□ -1.74
ATPAF2-208	ENST00000496852	KRTAP9-9	Q9BYP9	154 aa		4.19	□□□□□ -1.74
ATPAF2-208	ENST00000496852	KRTAP9-4	Q9BYQ2	154 aa		4.19	□□□□□ -1.74
ATPAF2-208	ENST00000496852	KRTAP4-12	Q9BQ66	201 aa		4.19	□□□□□ -1.74
ATPAF2-208	ENST00000496852	KRTAP12-4	P60329	112 aa		4.16	□□□□□ -1.74
ATPAF2-208	ENST00000496852	HMCN1	Q96RW7	5635 aa		4.13	□□□□□ -1.75
ATPAF2-208	ENST00000496852	KRTAP20-2	Q3LI61	65 aa		4.09	□□□□□ -1.76
ATPAF2-208	ENST00000496852	KRTAP5-3	Q6L8H2	238 aa		3.97	□□□□□ -1.77
ATPAF2-208	ENST00000496852	KRTAP6-2	Q3LI66	62 aa		3.92	□□□□□ -1.78
ATPAF2-208	ENST00000496852	KRTAP5-2	Q701N4	177 aa		3.92	□□□□□ -1.78
ATPAF2-208	ENST00000496852	KRTAP4-2	Q9BYR5	136 aa		3.87	□□□□□ -1.79
ATPAF2-208	ENST00000496852	MT3	P25713	68 aa		3.85	□□□□□ -1.79
ATPAF2-208	ENST00000496852	AHNAK2	Q8IVF2	5795 aa		3.84	□□□□□ -1.8
ATPAF2-208	ENST00000496852	GPR98	Q8WXG9	6306 aa		3.79	□□□□□ -1.8
ATPAF2-208	ENST00000496852	KRTAP4-11	Q9BYQ6	195 aa		3.71	□□□□□ -1.81
ATPAF2-208	ENST00000496852	KRTAP5-10	Q6L8G5	202 aa		3.7	□□□□□ -1.82
ATPAF2-208	ENST00000496852	OBSCN	Q5VST9	7968 aa		3.63	□□□□□ -1.83
ATPAF2-208	ENST00000496852	LCE3D	Q9BYE3	92 aa		3.56	□□□□□ -1.84
ATPAF2-208	ENST00000496852	KRTAP5-8	O75690	187 aa		3.5	□□□□□ -1.85
ATPAF2-208	ENST00000496852	KRTAP5-7	Q6L8G8	165 aa		3.49	□□□□□ -1.85
ATPAF2-208	ENST00000496852	LCE3E	Q5T5B0	92 aa		3.45	□□□□□ -1.86
ATPAF2-208	ENST00000496852	LCE1E	Q5T753	118 aa		3.44	□□□□□ -1.86
ATPAF2-208	ENST00000496852	KRTAP5-1	Q6L8H4	278 aa		3.43	□□□□□ -1.86
ATPAF2-208	ENST00000496852	MUC5AC	P98088	5654 aa		3.3	□□□□□ -1.88
ATPAF2-208	ENST00000496852	LCE1F	Q5T754	118 aa		3.29	□□□□□ -1.88
ATPAF2-208	ENST00000496852	LCE1B	Q5T7P3	118 aa		3.2	□□□□□ -1.9
ATPAF2-208	ENST00000496852	LCE1C	Q5T751	118 aa		3.19	□□□□□ -1.9
ATPAF2-208	ENST00000496852	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.06	□□□□□ -1.92
ATPAF2-208	ENST00000496852	AHNAK	Q09666	5890 aa	Known RBP	2.99	□□□□□ -1.93
ATPAF2-208	ENST00000496852	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.98	□□□□□ -1.93
ATPAF2-208	ENST00000496852	PRM1	P04553	51 aa		2.95	□□□□□ -1.94
ATPAF2-208	ENST00000496852	KRTAP5-11	Q6L8G4	156 aa		2.85	□□□□□ -1.95
ATPAF2-208	ENST00000496852	KRTAP21-2	Q3LI59	83 aa		2.77	□□□□□ -1.97
ATPAF2-208	ENST00000496852	KRTAP4-4	Q9BYR3	166 aa		2.47	□□□□□ -2.01
ATPAF2-208	ENST00000496852	PHGR1	C9JFL3	82 aa		2.45	□□□□□ -2.02
ATPAF2-208	ENST00000496852	MUC19	Q7Z5P9	8384 aa		2.21	□□□□□ -2.06
ATPAF2-208	ENST00000496852	KRTAP21-1	Q3LI58	79 aa		1.8	□□□□□ -2.12
ATPAF2-208	ENST00000496852	MUC16	Q8WXI7	14507 aa		1.55	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 43.5 ms