RNA–Protein interactions for RNA: ENST00000496608.1

NFYC-219, Transcript of nuclear transcription factor Y subunit gamma, human

TSL 2

Gene NFYC, Length 1,965 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFYC-219	ENST00000496608	KRTAP2-1	Q9BYU5	128 aa		4.58	□□□□□ -1.68
NFYC-219	ENST00000496608	MACF1	Q9UPN3	7388 aa	Known RBP	4.57	□□□□□ -1.68
NFYC-219	ENST00000496608	KMT2D	O14686	5537 aa		4.56	□□□□□ -1.68
NFYC-219	ENST00000496608	KRTAP9-6	A8MVA2	160 aa		4.5	□□□□□ -1.69
NFYC-219	ENST00000496608	SYNE2	Q8WXH0	6885 aa	Known RBP	4.49	□□□□□ -1.69
NFYC-219	ENST00000496608	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.46	□□□□□ -1.7
NFYC-219	ENST00000496608	KRTAP4-8	A0A0G2JLE6	195 aa		4.43	□□□□□ -1.7
NFYC-219	ENST00000496608	KRTAP19-7	Q3SYF9	63 aa		4.41	□□□□□ -1.7
NFYC-219	ENST00000496608	LCE3B	Q5TA77	95 aa		4.38	□□□□□ -1.71
NFYC-219	ENST00000496608	MT1L	Q93083	61 aa		4.33	□□□□□ -1.72
NFYC-219	ENST00000496608	KRTAP6-3	Q3LI67	103 aa		4.29	□□□□□ -1.72
NFYC-219	ENST00000496608	KRTAP5-9	P26371	169 aa		4.29	□□□□□ -1.72
NFYC-219	ENST00000496608	MT1E	P04732	61 aa		4.28	□□□□□ -1.72
NFYC-219	ENST00000496608	KRTAP4-7	Q9BYR0	210 aa		4.28	□□□□□ -1.72
NFYC-219	ENST00000496608	KRTAP4-12	Q9BQ66	201 aa		4.25	□□□□□ -1.73
NFYC-219	ENST00000496608	SPRR2F	Q96RM1	72 aa		4.25	□□□□□ -1.73
NFYC-219	ENST00000496608	MUC12	Q9UKN1	5478 aa		4.24	□□□□□ -1.73
NFYC-219	ENST00000496608	KRTAP9-9	Q9BYP9	154 aa		4.24	□□□□□ -1.73
NFYC-219	ENST00000496608	KRTAP9-4	Q9BYQ2	154 aa		4.24	□□□□□ -1.73
NFYC-219	ENST00000496608	KRTAP9-7	A8MTY7	169 aa		4.23	□□□□□ -1.73
NFYC-219	ENST00000496608	MDN1	Q9NU22	5596 aa		4.19	□□□□□ -1.74
NFYC-219	ENST00000496608	LCE1D	Q5T752	114 aa		4.12	□□□□□ -1.75
NFYC-219	ENST00000496608	KRTAP19-3	Q7Z4W3	81 aa		4.09	□□□□□ -1.75
NFYC-219	ENST00000496608	SPRR2E	P22531	72 aa		4.08	□□□□□ -1.76
NFYC-219	ENST00000496608	SPRR2B	P35325	72 aa		4.08	□□□□□ -1.76
NFYC-219	ENST00000496608	SPRR2A	P35326	72 aa		4.08	□□□□□ -1.76
NFYC-219	ENST00000496608	LCE1A	Q5T7P2	110 aa		4.08	□□□□□ -1.76
NFYC-219	ENST00000496608	NEB	P20929	6669 aa		4.06	□□□□□ -1.76
NFYC-219	ENST00000496608	MT1G	P13640	62 aa		4.06	□□□□□ -1.76
NFYC-219	ENST00000496608	KRTAP12-4	P60329	112 aa		4.04	□□□□□ -1.76
NFYC-219	ENST00000496608	LCE5A	Q5TCM9	118 aa		4.04	□□□□□ -1.76
NFYC-219	ENST00000496608	KRTAP4-9	Q9BYQ8	210 aa		4.03	□□□□□ -1.76
NFYC-219	ENST00000496608	MT1M	Q8N339	61 aa		3.98	□□□□□ -1.77
NFYC-219	ENST00000496608	KRTAP5-3	Q6L8H2	238 aa		3.97	□□□□□ -1.77
NFYC-219	ENST00000496608	DST	Q03001	7570 aa	Known RBP	3.97	□□□□□ -1.77
NFYC-219	ENST00000496608	KRTAP4-2	Q9BYR5	136 aa		3.96	□□□□□ -1.78
NFYC-219	ENST00000496608	SPRR2D	P22532	72 aa		3.94	□□□□□ -1.78
NFYC-219	ENST00000496608	KRTAP4-3	Q9BYR4	195 aa		3.93	□□□□□ -1.78
NFYC-219	ENST00000496608	MT1A	P04731	61 aa		3.89	□□□□□ -1.79
NFYC-219	ENST00000496608	KRTAP4-11	Q9BYQ6	195 aa		3.8	□□□□□ -1.8
NFYC-219	ENST00000496608	KRTAP20-1	Q3LI63	56 aa		3.76	□□□□□ -1.81
NFYC-219	ENST00000496608	LCE3E	Q5T5B0	92 aa		3.71	□□□□□ -1.82
NFYC-219	ENST00000496608	LCE3D	Q9BYE3	92 aa		3.71	□□□□□ -1.82
NFYC-219	ENST00000496608	KRTAP2-2	Q9BYT5	123 aa		3.7	□□□□□ -1.82
NFYC-219	ENST00000496608	KRTAP6-1	Q3LI64	71 aa		3.63	□□□□□ -1.83
NFYC-219	ENST00000496608	GPR98	Q8WXG9	6306 aa		3.62	□□□□□ -1.83
NFYC-219	ENST00000496608	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.62	□□□□□ -1.83
NFYC-219	ENST00000496608	PRM1	P04553	51 aa		3.58	□□□□□ -1.84
NFYC-219	ENST00000496608	LCE4A	Q5TA78	99 aa		3.54	□□□□□ -1.84
NFYC-219	ENST00000496608	KRTAP5-4	Q6L8H1	288 aa		3.54	□□□□□ -1.84
NFYC-219	ENST00000496608	SYNE1	Q8NF91	8797 aa	Known RBP	3.48	□□□□□ -1.85
NFYC-219	ENST00000496608	KRTAP6-2	Q3LI66	62 aa		3.41	□□□□□ -1.86
NFYC-219	ENST00000496608	MT4	P47944	62 aa		3.39	□□□□□ -1.87
NFYC-219	ENST00000496608	HMCN1	Q96RW7	5635 aa		3.37	□□□□□ -1.87
NFYC-219	ENST00000496608	MT3	P25713	68 aa		3.3	□□□□□ -1.88
NFYC-219	ENST00000496608	KRTAP20-2	Q3LI61	65 aa		3.3	□□□□□ -1.88
NFYC-219	ENST00000496608	KRTAP5-2	Q701N4	177 aa		3.18	□□□□□ -1.9
NFYC-219	ENST00000496608	OBSCN	Q5VST9	7968 aa		3.13	□□□□□ -1.91
NFYC-219	ENST00000496608	AHNAK2	Q8IVF2	5795 aa		3.06	□□□□□ -1.92
NFYC-219	ENST00000496608	AHNAK	Q09666	5890 aa	Known RBP	2.91	□□□□□ -1.94
NFYC-219	ENST00000496608	KRTAP5-10	Q6L8G5	202 aa		2.91	□□□□□ -1.94
NFYC-219	ENST00000496608	LCE1E	Q5T753	118 aa		2.84	□□□□□ -1.95
NFYC-219	ENST00000496608	KRTAP5-8	O75690	187 aa		2.8	□□□□□ -1.96
NFYC-219	ENST00000496608	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.8	□□□□□ -1.96
NFYC-219	ENST00000496608	KRTAP5-1	Q6L8H4	278 aa		2.76	□□□□□ -1.97
NFYC-219	ENST00000496608	KRTAP5-7	Q6L8G8	165 aa		2.75	□□□□□ -1.97
NFYC-219	ENST00000496608	MUC5AC	P98088	5654 aa		2.71	□□□□□ -1.98
NFYC-219	ENST00000496608	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.66	□□□□□ -1.98
NFYC-219	ENST00000496608	LCE1C	Q5T751	118 aa		2.63	□□□□□ -1.99
NFYC-219	ENST00000496608	LCE1B	Q5T7P3	118 aa		2.63	□□□□□ -1.99
NFYC-219	ENST00000496608	LCE1F	Q5T754	118 aa		2.5	□□□□□ -2.01
NFYC-219	ENST00000496608	KRTAP5-11	Q6L8G4	156 aa		2.49	□□□□□ -2.01
NFYC-219	ENST00000496608	KRTAP21-1	Q3LI58	79 aa		2.36	□□□□□ -2.03
NFYC-219	ENST00000496608	KRTAP21-2	Q3LI59	83 aa		2.35	□□□□□ -2.03
NFYC-219	ENST00000496608	KRTAP4-4	Q9BYR3	166 aa		2.25	□□□□□ -2.05
NFYC-219	ENST00000496608	PHGR1	C9JFL3	82 aa		2	□□□□□ -2.09
NFYC-219	ENST00000496608	MUC19	Q7Z5P9	8384 aa		1.88	□□□□□ -2.11
NFYC-219	ENST00000496608	MUC16	Q8WXI7	14507 aa		1.27	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 86.3 ms