RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
FN1-226ENST00000496542 H7BZZ5 65 aa4.64□□□□□ -1.67
FN1-226ENST00000496542 MT1MQ8N339 61 aa4.62□□□□□ -1.67
FN1-226ENST00000496542 SMIM26A0A096LP01 95 aa4.61□□□□□ -1.67
FN1-226ENST00000496542 A0A1B0GU69 56 aa4.61□□□□□ -1.67
FN1-226ENST00000496542 MT1LQ93083 61 aa4.61□□□□□ -1.67
FN1-226ENST00000496542 A8MU10 97 aa4.6□□□□□ -1.67
FN1-226ENST00000496542 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
FN1-226ENST00000496542 MT4P47944 62 aa4.57□□□□□ -1.68
FN1-226ENST00000496542 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
FN1-226ENST00000496542 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
FN1-226ENST00000496542 TNP1P09430 55 aa4.53□□□□□ -1.68
FN1-226ENST00000496542 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
FN1-226ENST00000496542 PCP4P48539 62 aa4.5□□□□□ -1.69
FN1-226ENST00000496542 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
FN1-226ENST00000496542 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
FN1-226ENST00000496542 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
FN1-226ENST00000496542 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
FN1-226ENST00000496542 CCDC179H3BU77 68 aa4.38□□□□□ -1.71
FN1-226ENST00000496542 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
FN1-226ENST00000496542 ATP5EP56381 51 aaPredicted RBP4.35□□□□□ -1.71
FN1-226ENST00000496542 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
FN1-226ENST00000496542 LINC01558Q9Y6Z2 57 aa4.34□□□□□ -1.71
FN1-226ENST00000496542 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
FN1-226ENST00000496542 UQCR11O14957 56 aa4.27□□□□□ -1.73
FN1-226ENST00000496542 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
FN1-226ENST00000496542 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
FN1-226ENST00000496542 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
FN1-226ENST00000496542 TMEM258P61165 79 aa4.18□□□□□ -1.74
FN1-226ENST00000496542 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
FN1-226ENST00000496542 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
FN1-226ENST00000496542 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
FN1-226ENST00000496542 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
FN1-226ENST00000496542 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
FN1-226ENST00000496542 K7ERS5 55 aa4.12□□□□□ -1.75
FN1-226ENST00000496542 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
FN1-226ENST00000496542 PSPHP1O15172 72 aa4.03□□□□□ -1.76
FN1-226ENST00000496542 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
FN1-226ENST00000496542 V9GYY9 64 aa3.98□□□□□ -1.77
FN1-226ENST00000496542 MT3P25713 68 aa3.97□□□□□ -1.77
FN1-226ENST00000496542 Q1T7F1 81 aa3.94□□□□□ -1.78
FN1-226ENST00000496542 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
FN1-226ENST00000496542 MT1AP04731 61 aa3.91□□□□□ -1.78
FN1-226ENST00000496542 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
FN1-226ENST00000496542 A6NED7 52 aa3.89□□□□□ -1.79
FN1-226ENST00000496542 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
FN1-226ENST00000496542 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
FN1-226ENST00000496542 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
FN1-226ENST00000496542 ROMO1P60602 79 aa3.81□□□□□ -1.8
FN1-226ENST00000496542 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
FN1-226ENST00000496542 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
FN1-226ENST00000496542 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
FN1-226ENST00000496542 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
FN1-226ENST00000496542 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
FN1-226ENST00000496542 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
FN1-226ENST00000496542 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
FN1-226ENST00000496542 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
FN1-226ENST00000496542 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
FN1-226ENST00000496542 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
FN1-226ENST00000496542 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
FN1-226ENST00000496542 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
FN1-226ENST00000496542 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
FN1-226ENST00000496542 BRK1Q8WUW1 75 aa3.28□□□□□ -1.88
FN1-226ENST00000496542 PRO0628Q9UI54 55 aa3.19□□□□□ -1.9
FN1-226ENST00000496542 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
FN1-226ENST00000496542 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
FN1-226ENST00000496542 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
FN1-226ENST00000496542 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
FN1-226ENST00000496542 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
FN1-226ENST00000496542 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
FN1-226ENST00000496542 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
FN1-226ENST00000496542 PHGR1C9JFL3 82 aa2.55□□□□□ -2
FN1-226ENST00000496542 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
FN1-226ENST00000496542 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
FN1-226ENST00000496542 PRM1P04553 51 aa1.95□□□□□ -2.1
FN1-226ENST00000496542 INE1O15225 51 aa1.93□□□□□ -2.1
FN1-226ENST00000496542 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
FN1-226ENST00000496542 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms