RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
TSSC4-210ENST00000496468 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
TSSC4-210ENST00000496468 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
TSSC4-210ENST00000496468 SPRR2DP22532 72 aa6.58□□□□□ -1.36
TSSC4-210ENST00000496468 MT1LQ93083 61 aa6.56□□□□□ -1.36
TSSC4-210ENST00000496468 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
TSSC4-210ENST00000496468 MT1GP13640 62 aa6.49□□□□□ -1.37
TSSC4-210ENST00000496468 KRTAP20-1Q3LI63 56 aa6.45□□□□□ -1.38
TSSC4-210ENST00000496468 MT1MQ8N339 61 aa6.42□□□□□ -1.38
TSSC4-210ENST00000496468 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
TSSC4-210ENST00000496468 KRTAP2-3P0C7H8 128 aa6.38□□□□□ -1.39
TSSC4-210ENST00000496468 KRTAP2-4Q9BYR9 128 aa6.38□□□□□ -1.39
TSSC4-210ENST00000496468 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
TSSC4-210ENST00000496468 PRAC1Q96KF2 57 aa6.29□□□□□ -1.4
TSSC4-210ENST00000496468 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
TSSC4-210ENST00000496468 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
TSSC4-210ENST00000496468 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
TSSC4-210ENST00000496468 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
TSSC4-210ENST00000496468 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
TSSC4-210ENST00000496468 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
TSSC4-210ENST00000496468 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
TSSC4-210ENST00000496468 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
TSSC4-210ENST00000496468 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
TSSC4-210ENST00000496468 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
TSSC4-210ENST00000496468 KRTAP5-5Q701N2 237 aaPredicted RBP5.83□□□□□ -1.48
TSSC4-210ENST00000496468 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
TSSC4-210ENST00000496468 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
TSSC4-210ENST00000496468 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
TSSC4-210ENST00000496468 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
TSSC4-210ENST00000496468 GPR98Q8WXG9 6306 aa5.73□□□□□ -1.49
TSSC4-210ENST00000496468 MT4P47944 62 aa5.7□□□□□ -1.5
TSSC4-210ENST00000496468 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
TSSC4-210ENST00000496468 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
TSSC4-210ENST00000496468 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
TSSC4-210ENST00000496468 MT1AP04731 61 aa5.6□□□□□ -1.51
TSSC4-210ENST00000496468 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
TSSC4-210ENST00000496468 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
TSSC4-210ENST00000496468 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
TSSC4-210ENST00000496468 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
TSSC4-210ENST00000496468 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
TSSC4-210ENST00000496468 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
TSSC4-210ENST00000496468 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
TSSC4-210ENST00000496468 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
TSSC4-210ENST00000496468 AHNAK2Q8IVF2 5795 aa5.23□□□□□ -1.57
TSSC4-210ENST00000496468 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
TSSC4-210ENST00000496468 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
TSSC4-210ENST00000496468 MT3P25713 68 aa5.09□□□□□ -1.59
TSSC4-210ENST00000496468 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
TSSC4-210ENST00000496468 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
TSSC4-210ENST00000496468 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
TSSC4-210ENST00000496468 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
TSSC4-210ENST00000496468 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
TSSC4-210ENST00000496468 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.66
TSSC4-210ENST00000496468 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
TSSC4-210ENST00000496468 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
TSSC4-210ENST00000496468 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
TSSC4-210ENST00000496468 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
TSSC4-210ENST00000496468 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
TSSC4-210ENST00000496468 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
TSSC4-210ENST00000496468 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
TSSC4-210ENST00000496468 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
TSSC4-210ENST00000496468 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
TSSC4-210ENST00000496468 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.73
TSSC4-210ENST00000496468 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
TSSC4-210ENST00000496468 H3BS24 57 aa4.1□□□□□ -1.75
TSSC4-210ENST00000496468 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
TSSC4-210ENST00000496468 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
TSSC4-210ENST00000496468 INE1O15225 51 aa3.88□□□□□ -1.79
TSSC4-210ENST00000496468 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
TSSC4-210ENST00000496468 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
TSSC4-210ENST00000496468 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
TSSC4-210ENST00000496468 PRM1P04553 51 aa3.6□□□□□ -1.83
TSSC4-210ENST00000496468 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
TSSC4-210ENST00000496468 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
TSSC4-210ENST00000496468 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
TSSC4-210ENST00000496468 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
TSSC4-210ENST00000496468 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
TSSC4-210ENST00000496468 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 99.4 ms