RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SPRR2EP22531 72 aa3.28□□□□□ -1.88
U2AF1-212ENST00000496462 SPRR2BP35325 72 aa3.28□□□□□ -1.88
U2AF1-212ENST00000496462 SPRR2AP35326 72 aa3.28□□□□□ -1.88
U2AF1-212ENST00000496462 KRTAP4-8A0A0G2JLE6 195 aa3.27□□□□□ -1.89
U2AF1-212ENST00000496462 KRTAP4-8Q9BYQ9 185 aa3.27□□□□□ -1.89
U2AF1-212ENST00000496462 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
U2AF1-212ENST00000496462 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
U2AF1-212ENST00000496462 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
U2AF1-212ENST00000496462 LOC100996750A0A140TA64 210 aa3.23□□□□□ -1.89
U2AF1-212ENST00000496462 KRTAP4-6Q9BYQ5 205 aa3.23□□□□□ -1.89
U2AF1-212ENST00000496462 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
U2AF1-212ENST00000496462 SPRR2DP22532 72 aa3.19□□□□□ -1.9
U2AF1-212ENST00000496462 MT1GP13640 62 aa3.15□□□□□ -1.91
U2AF1-212ENST00000496462 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
U2AF1-212ENST00000496462 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
U2AF1-212ENST00000496462 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
U2AF1-212ENST00000496462 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
U2AF1-212ENST00000496462 MT1EP04732 61 aa3.11□□□□□ -1.91
U2AF1-212ENST00000496462 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
U2AF1-212ENST00000496462 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
U2AF1-212ENST00000496462 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
U2AF1-212ENST00000496462 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
U2AF1-212ENST00000496462 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
U2AF1-212ENST00000496462 MT1LQ93083 61 aa3.03□□□□□ -1.92
U2AF1-212ENST00000496462 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
U2AF1-212ENST00000496462 MT1MQ8N339 61 aa2.97□□□□□ -1.93
U2AF1-212ENST00000496462 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.94
U2AF1-212ENST00000496462 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
U2AF1-212ENST00000496462 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
U2AF1-212ENST00000496462 INE1O15225 51 aa2.85□□□□□ -1.95
U2AF1-212ENST00000496462 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
U2AF1-212ENST00000496462 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
U2AF1-212ENST00000496462 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
U2AF1-212ENST00000496462 MT4P47944 62 aa2.81□□□□□ -1.96
U2AF1-212ENST00000496462 KRTAP4-7Q9BYR0 210 aa2.79□□□□□ -1.96
U2AF1-212ENST00000496462 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
U2AF1-212ENST00000496462 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
U2AF1-212ENST00000496462 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
U2AF1-212ENST00000496462 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
U2AF1-212ENST00000496462 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
U2AF1-212ENST00000496462 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
U2AF1-212ENST00000496462 MT1AP04731 61 aa2.67□□□□□ -1.98
U2AF1-212ENST00000496462 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
U2AF1-212ENST00000496462 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
U2AF1-212ENST00000496462 MT3P25713 68 aa2.56□□□□□ -2
U2AF1-212ENST00000496462 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
U2AF1-212ENST00000496462 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
U2AF1-212ENST00000496462 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
U2AF1-212ENST00000496462 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
U2AF1-212ENST00000496462 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
U2AF1-212ENST00000496462 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
U2AF1-212ENST00000496462 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
U2AF1-212ENST00000496462 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
U2AF1-212ENST00000496462 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
U2AF1-212ENST00000496462 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
U2AF1-212ENST00000496462 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
U2AF1-212ENST00000496462 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
U2AF1-212ENST00000496462 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
U2AF1-212ENST00000496462 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.04
U2AF1-212ENST00000496462 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
U2AF1-212ENST00000496462 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
U2AF1-212ENST00000496462 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
U2AF1-212ENST00000496462 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
U2AF1-212ENST00000496462 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
U2AF1-212ENST00000496462 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
U2AF1-212ENST00000496462 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
U2AF1-212ENST00000496462 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
U2AF1-212ENST00000496462 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
U2AF1-212ENST00000496462 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
U2AF1-212ENST00000496462 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
U2AF1-212ENST00000496462 PRM1P04553 51 aa1.88□□□□□ -2.11
U2AF1-212ENST00000496462 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
U2AF1-212ENST00000496462 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
U2AF1-212ENST00000496462 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
U2AF1-212ENST00000496462 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
U2AF1-212ENST00000496462 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
U2AF1-212ENST00000496462 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
U2AF1-212ENST00000496462 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 80.1 ms