RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 A8MU10 97 aa5.12□□□□□ -1.59
VTI1A-209ENST00000496445 A0A1B0GU69 56 aa5.11□□□□□ -1.59
VTI1A-209ENST00000496445 SMIM26A0A096LP01 95 aa5.1□□□□□ -1.59
VTI1A-209ENST00000496445 MT1MQ8N339 61 aa5.09□□□□□ -1.59
VTI1A-209ENST00000496445 MT1LQ93083 61 aa5.09□□□□□ -1.59
VTI1A-209ENST00000496445 HMCN1Q96RW7 5635 aa5.08□□□□□ -1.6
VTI1A-209ENST00000496445 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
VTI1A-209ENST00000496445 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
VTI1A-209ENST00000496445 C10orf95Q9H7T3 257 aa5.05□□□□□ -1.6
VTI1A-209ENST00000496445 ANAPC13Q9BS18 74 aa5.01□□□□□ -1.61
VTI1A-209ENST00000496445 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
VTI1A-209ENST00000496445 TNP1P09430 55 aa4.98□□□□□ -1.61
VTI1A-209ENST00000496445 CCDC179H3BU77 68 aa4.97□□□□□ -1.61
VTI1A-209ENST00000496445 MT4P47944 62 aa4.96□□□□□ -1.62
VTI1A-209ENST00000496445 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
VTI1A-209ENST00000496445 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
VTI1A-209ENST00000496445 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
VTI1A-209ENST00000496445 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
VTI1A-209ENST00000496445 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
VTI1A-209ENST00000496445 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
VTI1A-209ENST00000496445 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
VTI1A-209ENST00000496445 UQCR11O14957 56 aa4.76□□□□□ -1.65
VTI1A-209ENST00000496445 KRTAP5-10Q6L8G5 202 aa4.75□□□□□ -1.65
VTI1A-209ENST00000496445 TMEM258P61165 79 aa4.74□□□□□ -1.65
VTI1A-209ENST00000496445 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
VTI1A-209ENST00000496445 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
VTI1A-209ENST00000496445 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
VTI1A-209ENST00000496445 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
VTI1A-209ENST00000496445 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
VTI1A-209ENST00000496445 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
VTI1A-209ENST00000496445 MT3P25713 68 aa4.55□□□□□ -1.68
VTI1A-209ENST00000496445 KRTAP5-7Q6L8G8 165 aa4.55□□□□□ -1.68
VTI1A-209ENST00000496445 K7ERS5 55 aa4.53□□□□□ -1.68
VTI1A-209ENST00000496445 PSPHP1O15172 72 aa4.52□□□□□ -1.69
VTI1A-209ENST00000496445 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
VTI1A-209ENST00000496445 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
VTI1A-209ENST00000496445 PCP4P48539 62 aa4.47□□□□□ -1.69
VTI1A-209ENST00000496445 Q1T7F1 81 aa4.47□□□□□ -1.69
VTI1A-209ENST00000496445 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
VTI1A-209ENST00000496445 V9GYY9 64 aa4.46□□□□□ -1.7
VTI1A-209ENST00000496445 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
VTI1A-209ENST00000496445 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
VTI1A-209ENST00000496445 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
VTI1A-209ENST00000496445 A6NED7 52 aa4.34□□□□□ -1.71
VTI1A-209ENST00000496445 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
VTI1A-209ENST00000496445 MT1AP04731 61 aa4.31□□□□□ -1.72
VTI1A-209ENST00000496445 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
VTI1A-209ENST00000496445 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
VTI1A-209ENST00000496445 ROMO1P60602 79 aa4.26□□□□□ -1.73
VTI1A-209ENST00000496445 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
VTI1A-209ENST00000496445 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
VTI1A-209ENST00000496445 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
VTI1A-209ENST00000496445 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
VTI1A-209ENST00000496445 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
VTI1A-209ENST00000496445 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
VTI1A-209ENST00000496445 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
VTI1A-209ENST00000496445 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
VTI1A-209ENST00000496445 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
VTI1A-209ENST00000496445 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
VTI1A-209ENST00000496445 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
VTI1A-209ENST00000496445 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
VTI1A-209ENST00000496445 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
VTI1A-209ENST00000496445 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
VTI1A-209ENST00000496445 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
VTI1A-209ENST00000496445 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
VTI1A-209ENST00000496445 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
VTI1A-209ENST00000496445 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
VTI1A-209ENST00000496445 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
VTI1A-209ENST00000496445 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
VTI1A-209ENST00000496445 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
VTI1A-209ENST00000496445 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
VTI1A-209ENST00000496445 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
VTI1A-209ENST00000496445 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
VTI1A-209ENST00000496445 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
VTI1A-209ENST00000496445 PRM1P04553 51 aa2.19□□□□□ -2.06
VTI1A-209ENST00000496445 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
VTI1A-209ENST00000496445 INE1O15225 51 aa1.89□□□□□ -2.11
VTI1A-209ENST00000496445 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms