RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
HCN3-204ENST00000496230 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
HCN3-204ENST00000496230 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
HCN3-204ENST00000496230 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
HCN3-204ENST00000496230 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
HCN3-204ENST00000496230 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
HCN3-204ENST00000496230 MT1EP04732 61 aa4.17□□□□□ -1.74
HCN3-204ENST00000496230 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
HCN3-204ENST00000496230 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
HCN3-204ENST00000496230 MT1LQ93083 61 aa4.15□□□□□ -1.74
HCN3-204ENST00000496230 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
HCN3-204ENST00000496230 MT1GP13640 62 aa4.08□□□□□ -1.76
HCN3-204ENST00000496230 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
HCN3-204ENST00000496230 MT1MQ8N339 61 aa3.94□□□□□ -1.78
HCN3-204ENST00000496230 SPRR2EP22531 72 aa3.8□□□□□ -1.8
HCN3-204ENST00000496230 SPRR2BP35325 72 aa3.8□□□□□ -1.8
HCN3-204ENST00000496230 SPRR2AP35326 72 aa3.8□□□□□ -1.8
HCN3-204ENST00000496230 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
HCN3-204ENST00000496230 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
HCN3-204ENST00000496230 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
HCN3-204ENST00000496230 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
HCN3-204ENST00000496230 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
HCN3-204ENST00000496230 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
HCN3-204ENST00000496230 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
HCN3-204ENST00000496230 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
HCN3-204ENST00000496230 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
HCN3-204ENST00000496230 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
HCN3-204ENST00000496230 SPRR2DP22532 72 aa3.62□□□□□ -1.83
HCN3-204ENST00000496230 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
HCN3-204ENST00000496230 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
HCN3-204ENST00000496230 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
HCN3-204ENST00000496230 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
HCN3-204ENST00000496230 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
HCN3-204ENST00000496230 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
HCN3-204ENST00000496230 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
HCN3-204ENST00000496230 MT1AP04731 61 aa3.41□□□□□ -1.86
HCN3-204ENST00000496230 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.86
HCN3-204ENST00000496230 LCE4AQ5TA78 99 aa3.4□□□□□ -1.86
HCN3-204ENST00000496230 MT4P47944 62 aa3.38□□□□□ -1.87
HCN3-204ENST00000496230 NEBP20929 6669 aa3.35□□□□□ -1.87
HCN3-204ENST00000496230 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
HCN3-204ENST00000496230 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
HCN3-204ENST00000496230 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
HCN3-204ENST00000496230 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
HCN3-204ENST00000496230 LCE1EQ5T753 118 aa3.21□□□□□ -1.89
HCN3-204ENST00000496230 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
HCN3-204ENST00000496230 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
HCN3-204ENST00000496230 PRM1P04553 51 aa3.16□□□□□ -1.9
HCN3-204ENST00000496230 MT3P25713 68 aa3.13□□□□□ -1.91
HCN3-204ENST00000496230 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
HCN3-204ENST00000496230 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
HCN3-204ENST00000496230 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
HCN3-204ENST00000496230 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
HCN3-204ENST00000496230 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
HCN3-204ENST00000496230 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
HCN3-204ENST00000496230 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
HCN3-204ENST00000496230 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
HCN3-204ENST00000496230 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
HCN3-204ENST00000496230 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
HCN3-204ENST00000496230 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
HCN3-204ENST00000496230 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
HCN3-204ENST00000496230 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
HCN3-204ENST00000496230 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
HCN3-204ENST00000496230 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
HCN3-204ENST00000496230 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
HCN3-204ENST00000496230 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
HCN3-204ENST00000496230 KRTAP5-8O75690 187 aa2.4□□□□□ -2.02
HCN3-204ENST00000496230 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
HCN3-204ENST00000496230 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
HCN3-204ENST00000496230 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
HCN3-204ENST00000496230 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
HCN3-204ENST00000496230 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
HCN3-204ENST00000496230 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
HCN3-204ENST00000496230 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
HCN3-204ENST00000496230 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
HCN3-204ENST00000496230 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
HCN3-204ENST00000496230 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
HCN3-204ENST00000496230 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 139.7 ms