RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
VPS13B-206ENST00000496144 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-206ENST00000496144 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
VPS13B-206ENST00000496144 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
VPS13B-206ENST00000496144 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
VPS13B-206ENST00000496144 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-206ENST00000496144 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
VPS13B-206ENST00000496144 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
VPS13B-206ENST00000496144 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.9
VPS13B-206ENST00000496144 KRTAP4-8A0A0G2JLE6 195 aa3.13□□□□□ -1.91
VPS13B-206ENST00000496144 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
VPS13B-206ENST00000496144 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
VPS13B-206ENST00000496144 MT1GP13640 62 aa3.11□□□□□ -1.91
VPS13B-206ENST00000496144 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
VPS13B-206ENST00000496144 KRTAP19-4Q3LI73 84 aa3.05□□□□□ -1.92
VPS13B-206ENST00000496144 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
VPS13B-206ENST00000496144 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
VPS13B-206ENST00000496144 MT1EP04732 61 aa3.01□□□□□ -1.93
VPS13B-206ENST00000496144 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
VPS13B-206ENST00000496144 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
VPS13B-206ENST00000496144 MT4P47944 62 aa2.98□□□□□ -1.93
VPS13B-206ENST00000496144 KMT2DO14686 5537 aa2.94□□□□□ -1.94
VPS13B-206ENST00000496144 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
VPS13B-206ENST00000496144 MT1LQ93083 61 aa2.91□□□□□ -1.94
VPS13B-206ENST00000496144 MT1MQ8N339 61 aa2.91□□□□□ -1.94
VPS13B-206ENST00000496144 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.95
VPS13B-206ENST00000496144 KRTAP4-9Q9BYQ8 210 aa2.9□□□□□ -1.95
VPS13B-206ENST00000496144 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
VPS13B-206ENST00000496144 KRTAP4-7Q9BYR0 210 aa2.85□□□□□ -1.95
VPS13B-206ENST00000496144 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
VPS13B-206ENST00000496144 INE1O15225 51 aa2.75□□□□□ -1.97
VPS13B-206ENST00000496144 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
VPS13B-206ENST00000496144 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
VPS13B-206ENST00000496144 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
VPS13B-206ENST00000496144 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
VPS13B-206ENST00000496144 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
VPS13B-206ENST00000496144 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
VPS13B-206ENST00000496144 MT1AP04731 61 aa2.57□□□□□ -2
VPS13B-206ENST00000496144 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
VPS13B-206ENST00000496144 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
VPS13B-206ENST00000496144 MT3P25713 68 aa2.54□□□□□ -2
VPS13B-206ENST00000496144 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
VPS13B-206ENST00000496144 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-206ENST00000496144 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
VPS13B-206ENST00000496144 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.02
VPS13B-206ENST00000496144 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
VPS13B-206ENST00000496144 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
VPS13B-206ENST00000496144 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
VPS13B-206ENST00000496144 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
VPS13B-206ENST00000496144 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
VPS13B-206ENST00000496144 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
VPS13B-206ENST00000496144 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
VPS13B-206ENST00000496144 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
VPS13B-206ENST00000496144 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
VPS13B-206ENST00000496144 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
VPS13B-206ENST00000496144 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
VPS13B-206ENST00000496144 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
VPS13B-206ENST00000496144 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
VPS13B-206ENST00000496144 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
VPS13B-206ENST00000496144 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
VPS13B-206ENST00000496144 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
VPS13B-206ENST00000496144 PRM1P04553 51 aa2.08□□□□□ -2.08
VPS13B-206ENST00000496144 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
VPS13B-206ENST00000496144 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
VPS13B-206ENST00000496144 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
VPS13B-206ENST00000496144 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
VPS13B-206ENST00000496144 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
VPS13B-206ENST00000496144 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.1
VPS13B-206ENST00000496144 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.12
VPS13B-206ENST00000496144 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
VPS13B-206ENST00000496144 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
VPS13B-206ENST00000496144 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
VPS13B-206ENST00000496144 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
VPS13B-206ENST00000496144 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
VPS13B-206ENST00000496144 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.16
VPS13B-206ENST00000496144 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
VPS13B-206ENST00000496144 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
VPS13B-206ENST00000496144 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms