RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 NEBP20929 6669 aa3.35□□□□□ -1.87
TM9SF4-207ENST00000495749 KRTAP19-6Q3LI70 58 aa3.35□□□□□ -1.87
TM9SF4-207ENST00000495749 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
TM9SF4-207ENST00000495749 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
TM9SF4-207ENST00000495749 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
TM9SF4-207ENST00000495749 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
TM9SF4-207ENST00000495749 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
TM9SF4-207ENST00000495749 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
TM9SF4-207ENST00000495749 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
TM9SF4-207ENST00000495749 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
TM9SF4-207ENST00000495749 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
TM9SF4-207ENST00000495749 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
TM9SF4-207ENST00000495749 MT1EP04732 61 aa3.15□□□□□ -1.9
TM9SF4-207ENST00000495749 MT1LQ93083 61 aa3.14□□□□□ -1.91
TM9SF4-207ENST00000495749 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
TM9SF4-207ENST00000495749 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
TM9SF4-207ENST00000495749 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
TM9SF4-207ENST00000495749 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
TM9SF4-207ENST00000495749 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
TM9SF4-207ENST00000495749 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
TM9SF4-207ENST00000495749 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
TM9SF4-207ENST00000495749 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
TM9SF4-207ENST00000495749 MT1GP13640 62 aa3.04□□□□□ -1.92
TM9SF4-207ENST00000495749 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
TM9SF4-207ENST00000495749 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
TM9SF4-207ENST00000495749 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
TM9SF4-207ENST00000495749 KRTAP19-4Q3LI73 84 aa3.01□□□□□ -1.93
TM9SF4-207ENST00000495749 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
TM9SF4-207ENST00000495749 MT1MQ8N339 61 aa2.97□□□□□ -1.93
TM9SF4-207ENST00000495749 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
TM9SF4-207ENST00000495749 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
TM9SF4-207ENST00000495749 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
TM9SF4-207ENST00000495749 SPRR2EP22531 72 aa2.85□□□□□ -1.95
TM9SF4-207ENST00000495749 SPRR2BP35325 72 aa2.85□□□□□ -1.95
TM9SF4-207ENST00000495749 SPRR2AP35326 72 aa2.85□□□□□ -1.95
TM9SF4-207ENST00000495749 LCE1AQ5T7P2 110 aa2.85□□□□□ -1.95
TM9SF4-207ENST00000495749 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
TM9SF4-207ENST00000495749 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
TM9SF4-207ENST00000495749 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
TM9SF4-207ENST00000495749 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
TM9SF4-207ENST00000495749 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
TM9SF4-207ENST00000495749 SPRR2DP22532 72 aa2.75□□□□□ -1.97
TM9SF4-207ENST00000495749 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
TM9SF4-207ENST00000495749 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.97
TM9SF4-207ENST00000495749 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
TM9SF4-207ENST00000495749 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
TM9SF4-207ENST00000495749 LCE1DQ5T752 114 aa2.67□□□□□ -1.98
TM9SF4-207ENST00000495749 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
TM9SF4-207ENST00000495749 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
TM9SF4-207ENST00000495749 MT1AP04731 61 aa2.59□□□□□ -1.99
TM9SF4-207ENST00000495749 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
TM9SF4-207ENST00000495749 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
TM9SF4-207ENST00000495749 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
TM9SF4-207ENST00000495749 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
TM9SF4-207ENST00000495749 PRM1P04553 51 aa2.49□□□□□ -2.01
TM9SF4-207ENST00000495749 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
TM9SF4-207ENST00000495749 MT4P47944 62 aa2.48□□□□□ -2.01
TM9SF4-207ENST00000495749 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
TM9SF4-207ENST00000495749 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
TM9SF4-207ENST00000495749 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
TM9SF4-207ENST00000495749 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
TM9SF4-207ENST00000495749 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
TM9SF4-207ENST00000495749 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
TM9SF4-207ENST00000495749 MT3P25713 68 aa2.36□□□□□ -2.03
TM9SF4-207ENST00000495749 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
TM9SF4-207ENST00000495749 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
TM9SF4-207ENST00000495749 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
TM9SF4-207ENST00000495749 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
TM9SF4-207ENST00000495749 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
TM9SF4-207ENST00000495749 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
TM9SF4-207ENST00000495749 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
TM9SF4-207ENST00000495749 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
TM9SF4-207ENST00000495749 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
TM9SF4-207ENST00000495749 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
TM9SF4-207ENST00000495749 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
TM9SF4-207ENST00000495749 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
TM9SF4-207ENST00000495749 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
TM9SF4-207ENST00000495749 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 76.1 ms