RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 MT4P47944 62 aa5.11□□□□□ -1.59
RAPGEF3-214ENST00000495465 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
RAPGEF3-214ENST00000495465 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
RAPGEF3-214ENST00000495465 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
RAPGEF3-214ENST00000495465 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
RAPGEF3-214ENST00000495465 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
RAPGEF3-214ENST00000495465 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
RAPGEF3-214ENST00000495465 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
RAPGEF3-214ENST00000495465 UQCR11O14957 56 aa4.95□□□□□ -1.62
RAPGEF3-214ENST00000495465 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
RAPGEF3-214ENST00000495465 PCP4P48539 62 aa4.89□□□□□ -1.63
RAPGEF3-214ENST00000495465 TMEM258P61165 79 aa4.88□□□□□ -1.63
RAPGEF3-214ENST00000495465 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
RAPGEF3-214ENST00000495465 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
RAPGEF3-214ENST00000495465 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
RAPGEF3-214ENST00000495465 K7ERS5 55 aa4.76□□□□□ -1.65
RAPGEF3-214ENST00000495465 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
RAPGEF3-214ENST00000495465 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
RAPGEF3-214ENST00000495465 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
RAPGEF3-214ENST00000495465 PSPHP1O15172 72 aa4.71□□□□□ -1.66
RAPGEF3-214ENST00000495465 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
RAPGEF3-214ENST00000495465 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
RAPGEF3-214ENST00000495465 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
RAPGEF3-214ENST00000495465 V9GYY9 64 aa4.66□□□□□ -1.66
RAPGEF3-214ENST00000495465 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
RAPGEF3-214ENST00000495465 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
RAPGEF3-214ENST00000495465 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
RAPGEF3-214ENST00000495465 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
RAPGEF3-214ENST00000495465 Q1T7F1 81 aa4.62□□□□□ -1.67
RAPGEF3-214ENST00000495465 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
RAPGEF3-214ENST00000495465 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
RAPGEF3-214ENST00000495465 A6NED7 52 aa4.53□□□□□ -1.68
RAPGEF3-214ENST00000495465 RPS28P62857 69 aaKnown RBP4.49□□□□□ -1.69
RAPGEF3-214ENST00000495465 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
RAPGEF3-214ENST00000495465 ROMO1P60602 79 aa4.42□□□□□ -1.7
RAPGEF3-214ENST00000495465 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
RAPGEF3-214ENST00000495465 MT1AP04731 61 aa4.41□□□□□ -1.7
RAPGEF3-214ENST00000495465 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
RAPGEF3-214ENST00000495465 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
RAPGEF3-214ENST00000495465 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
RAPGEF3-214ENST00000495465 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
RAPGEF3-214ENST00000495465 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
RAPGEF3-214ENST00000495465 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
RAPGEF3-214ENST00000495465 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.74
RAPGEF3-214ENST00000495465 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
RAPGEF3-214ENST00000495465 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
RAPGEF3-214ENST00000495465 MUC5ACP98088 5654 aa4.09□□□□□ -1.76
RAPGEF3-214ENST00000495465 MT3P25713 68 aa4.05□□□□□ -1.76
RAPGEF3-214ENST00000495465 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
RAPGEF3-214ENST00000495465 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
RAPGEF3-214ENST00000495465 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
RAPGEF3-214ENST00000495465 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
RAPGEF3-214ENST00000495465 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
RAPGEF3-214ENST00000495465 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
RAPGEF3-214ENST00000495465 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
RAPGEF3-214ENST00000495465 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
RAPGEF3-214ENST00000495465 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
RAPGEF3-214ENST00000495465 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
RAPGEF3-214ENST00000495465 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
RAPGEF3-214ENST00000495465 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
RAPGEF3-214ENST00000495465 H3BS24 57 aa3.4□□□□□ -1.87
RAPGEF3-214ENST00000495465 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
RAPGEF3-214ENST00000495465 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
RAPGEF3-214ENST00000495465 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
RAPGEF3-214ENST00000495465 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
RAPGEF3-214ENST00000495465 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
RAPGEF3-214ENST00000495465 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
RAPGEF3-214ENST00000495465 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
RAPGEF3-214ENST00000495465 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
RAPGEF3-214ENST00000495465 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
RAPGEF3-214ENST00000495465 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
RAPGEF3-214ENST00000495465 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
RAPGEF3-214ENST00000495465 A0A0A0MQY5 61 aa2.57□□□□□ -2
RAPGEF3-214ENST00000495465 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
RAPGEF3-214ENST00000495465 INE1O15225 51 aa2.43□□□□□ -2.02
RAPGEF3-214ENST00000495465 PRM1P04553 51 aa2.27□□□□□ -2.05
RAPGEF3-214ENST00000495465 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
RAPGEF3-214ENST00000495465 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 165.3 ms