RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 KRTAP13-4Q3LI77 160 aa3.22□□□□□ -1.89
RPGR-210ENST00000494841 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
RPGR-210ENST00000494841 A0A1B0GU33 70 aa3.2□□□□□ -1.9
RPGR-210ENST00000494841 PRR15LQ9BU68 103 aa3.2□□□□□ -1.9
RPGR-210ENST00000494841 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
RPGR-210ENST00000494841 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
RPGR-210ENST00000494841 SPATA8Q6RVD6 105 aa3.19□□□□□ -1.9
RPGR-210ENST00000494841 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
RPGR-210ENST00000494841 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
RPGR-210ENST00000494841 A0A0D9SG42 100 aa3.15□□□□□ -1.91
RPGR-210ENST00000494841 ROMO1P60602 79 aa3.14□□□□□ -1.91
RPGR-210ENST00000494841 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
RPGR-210ENST00000494841 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
RPGR-210ENST00000494841 MT1XP80297 61 aa3.11□□□□□ -1.91
RPGR-210ENST00000494841 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
RPGR-210ENST00000494841 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.91
RPGR-210ENST00000494841 KMT2DO14686 5537 aa3.08□□□□□ -1.92
RPGR-210ENST00000494841 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
RPGR-210ENST00000494841 UQCR11O14957 56 aa3.07□□□□□ -1.92
RPGR-210ENST00000494841 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
RPGR-210ENST00000494841 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
RPGR-210ENST00000494841 MIR22HGQ0VDD5 57 aa3.05□□□□□ -1.92
RPGR-210ENST00000494841 K7ERS5 55 aa3.03□□□□□ -1.92
RPGR-210ENST00000494841 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
RPGR-210ENST00000494841 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
RPGR-210ENST00000494841 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
RPGR-210ENST00000494841 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
RPGR-210ENST00000494841 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
RPGR-210ENST00000494841 C10orf95Q9H7T3 257 aa2.94□□□□□ -1.94
RPGR-210ENST00000494841 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
RPGR-210ENST00000494841 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
RPGR-210ENST00000494841 NEBP20929 6669 aa2.9□□□□□ -1.95
RPGR-210ENST00000494841 KRTAP8-1Q8IUC2 63 aa2.89□□□□□ -1.95
RPGR-210ENST00000494841 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
RPGR-210ENST00000494841 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
RPGR-210ENST00000494841 TNP1P09430 55 aa2.85□□□□□ -1.95
RPGR-210ENST00000494841 SPRR2FQ96RM1 72 aa2.85□□□□□ -1.95
RPGR-210ENST00000494841 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
RPGR-210ENST00000494841 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
RPGR-210ENST00000494841 SPRR2EP22531 72 aa2.76□□□□□ -1.97
RPGR-210ENST00000494841 SPRR2BP35325 72 aa2.76□□□□□ -1.97
RPGR-210ENST00000494841 SPRR2AP35326 72 aa2.76□□□□□ -1.97
RPGR-210ENST00000494841 MT1EP04732 61 aa2.74□□□□□ -1.97
RPGR-210ENST00000494841 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
RPGR-210ENST00000494841 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
RPGR-210ENST00000494841 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
RPGR-210ENST00000494841 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
RPGR-210ENST00000494841 SPRR2DP22532 72 aa2.66□□□□□ -1.98
RPGR-210ENST00000494841 MT1LQ93083 61 aa2.65□□□□□ -1.99
RPGR-210ENST00000494841 MT1GP13640 62 aa2.63□□□□□ -1.99
RPGR-210ENST00000494841 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
RPGR-210ENST00000494841 KRTAP2-3P0C7H8 128 aa2.61□□□□□ -1.99
RPGR-210ENST00000494841 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
RPGR-210ENST00000494841 MT1MQ8N339 61 aa2.6□□□□□ -1.99
RPGR-210ENST00000494841 INE1O15225 51 aa2.55□□□□□ -2
RPGR-210ENST00000494841 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
RPGR-210ENST00000494841 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
RPGR-210ENST00000494841 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
RPGR-210ENST00000494841 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
RPGR-210ENST00000494841 MT4P47944 62 aa2.34□□□□□ -2.03
RPGR-210ENST00000494841 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
RPGR-210ENST00000494841 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
RPGR-210ENST00000494841 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
RPGR-210ENST00000494841 MT1AP04731 61 aa2.24□□□□□ -2.05
RPGR-210ENST00000494841 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
RPGR-210ENST00000494841 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
RPGR-210ENST00000494841 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
RPGR-210ENST00000494841 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
RPGR-210ENST00000494841 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
RPGR-210ENST00000494841 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
RPGR-210ENST00000494841 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
RPGR-210ENST00000494841 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
RPGR-210ENST00000494841 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
RPGR-210ENST00000494841 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
RPGR-210ENST00000494841 PRM1P04553 51 aa1.45□□□□□ -2.18
RPGR-210ENST00000494841 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
RPGR-210ENST00000494841 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
RPGR-210ENST00000494841 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 32.1 ms