RNA–Protein interactions for RNA: ENST00000494727.1

ACSS2-223, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 2

Gene ACSS2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-223	ENST00000494727	SPINT4	Q6UDR6	99 aa		3.89	□□□□□ -1.79
ACSS2-223	ENST00000494727		A0A1B0GU33	70 aa		3.88	□□□□□ -1.79
ACSS2-223	ENST00000494727		A0A1B0GU69	56 aa		3.85	□□□□□ -1.79
ACSS2-223	ENST00000494727	SPRR2D	P22532	72 aa		3.84	□□□□□ -1.79
ACSS2-223	ENST00000494727	KRTAP2-3	P0C7H8	128 aa		3.82	□□□□□ -1.8
ACSS2-223	ENST00000494727	KRTAP2-4	Q9BYR9	128 aa		3.82	□□□□□ -1.8
ACSS2-223	ENST00000494727	KRTAP12-1	P59990	96 aa		3.81	□□□□□ -1.8
ACSS2-223	ENST00000494727		A8MU10	97 aa		3.8	□□□□□ -1.8
ACSS2-223	ENST00000494727	ATP5E	P56381	51 aa	Predicted RBP	3.78	□□□□□ -1.8
ACSS2-223	ENST00000494727	LCE3E	Q5T5B0	92 aa		3.78	□□□□□ -1.8
ACSS2-223	ENST00000494727	SMIM26	A0A096LP01	95 aa		3.77	□□□□□ -1.81
ACSS2-223	ENST00000494727	KRTAP5-1	Q6L8H4	278 aa		3.76	□□□□□ -1.81
ACSS2-223	ENST00000494727	PRR15L	Q9BU68	103 aa		3.73	□□□□□ -1.81
ACSS2-223	ENST00000494727	TMEM258	P61165	79 aa		3.71	□□□□□ -1.82
ACSS2-223	ENST00000494727	KRTAP2-1	Q9BYU5	128 aa		3.71	□□□□□ -1.82
ACSS2-223	ENST00000494727	KRTAP19-7	Q3SYF9	63 aa		3.7	□□□□□ -1.82
ACSS2-223	ENST00000494727	LINC01558	Q9Y6Z2	57 aa		3.69	□□□□□ -1.82
ACSS2-223	ENST00000494727	MT1E	P04732	61 aa		3.68	□□□□□ -1.82
ACSS2-223	ENST00000494727	KRTAP19-5	Q3LI72	72 aa		3.66	□□□□□ -1.82
ACSS2-223	ENST00000494727	C10orf95	Q9H7T3	257 aa		3.64	□□□□□ -1.83
ACSS2-223	ENST00000494727	KRTAP19-3	Q7Z4W3	81 aa		3.63	□□□□□ -1.83
ACSS2-223	ENST00000494727	TNP1	P09430	55 aa		3.61	□□□□□ -1.83
ACSS2-223	ENST00000494727	LCE3A	Q5TA76	89 aa		3.61	□□□□□ -1.83
ACSS2-223	ENST00000494727	UQCR11	O14957	56 aa		3.6	□□□□□ -1.83
ACSS2-223	ENST00000494727	KRTAP4-4	Q9BYR3	166 aa		3.57	□□□□□ -1.84
ACSS2-223	ENST00000494727	KRTAP5-4	Q6L8H1	288 aa		3.56	□□□□□ -1.84
ACSS2-223	ENST00000494727	MIR22HG	Q0VDD5	57 aa		3.55	□□□□□ -1.84
ACSS2-223	ENST00000494727	PSPHP1	O15172	72 aa		3.54	□□□□□ -1.84
ACSS2-223	ENST00000494727	MT1L	Q93083	61 aa		3.53	□□□□□ -1.84
ACSS2-223	ENST00000494727	MT1G	P13640	62 aa		3.52	□□□□□ -1.85
ACSS2-223	ENST00000494727	PP632	Q6XCG6	107 aa		3.51	□□□□□ -1.85
ACSS2-223	ENST00000494727	MT1M	Q8N339	61 aa		3.51	□□□□□ -1.85
ACSS2-223	ENST00000494727		V9GYY9	64 aa		3.48	□□□□□ -1.85
ACSS2-223	ENST00000494727	KRTAP4-3	Q9BYR4	195 aa		3.47	□□□□□ -1.85
ACSS2-223	ENST00000494727		K7ERS5	55 aa		3.46	□□□□□ -1.86
ACSS2-223	ENST00000494727	DST	Q03001	7570 aa	Known RBP	3.45	□□□□□ -1.86
ACSS2-223	ENST00000494727		Q1T7F1	81 aa		3.45	□□□□□ -1.86
ACSS2-223	ENST00000494727	KRTAP12-3	P60328	96 aa		3.44	□□□□□ -1.86
ACSS2-223	ENST00000494727	GPR98	Q8WXG9	6306 aa		3.43	□□□□□ -1.86
ACSS2-223	ENST00000494727		A6NED7	52 aa		3.41	□□□□□ -1.86
ACSS2-223	ENST00000494727	KRTAP25-1	Q3LHN0	102 aa		3.4	□□□□□ -1.87
ACSS2-223	ENST00000494727	MT4	P47944	62 aa		3.38	□□□□□ -1.87
ACSS2-223	ENST00000494727	CDC42SE1	Q9NRR8	79 aa		3.3	□□□□□ -1.88
ACSS2-223	ENST00000494727	HMCN1	Q96RW7	5635 aa		3.27	□□□□□ -1.89
ACSS2-223	ENST00000494727	RPS28	P62857	69 aa	Known RBP	3.25	□□□□□ -1.89
ACSS2-223	ENST00000494727	ROMO1	P60602	79 aa		3.23	□□□□□ -1.89
ACSS2-223	ENST00000494727	OBSCN	Q5VST9	7968 aa		3.23	□□□□□ -1.89
ACSS2-223	ENST00000494727	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.18	□□□□□ -1.9
ACSS2-223	ENST00000494727	PRO0628	Q9UI54	55 aa		3.18	□□□□□ -1.9
ACSS2-223	ENST00000494727	AHNAK2	Q8IVF2	5795 aa		3.15	□□□□□ -1.91
ACSS2-223	ENST00000494727	KRTAP20-2	Q3LI61	65 aa		3.12	□□□□□ -1.91
ACSS2-223	ENST00000494727	KRTAP12-4	P60329	112 aa		3.09	□□□□□ -1.91
ACSS2-223	ENST00000494727	LCE3D	Q9BYE3	92 aa		3.08	□□□□□ -1.92
ACSS2-223	ENST00000494727	SYNE1	Q8NF91	8797 aa	Known RBP	3.08	□□□□□ -1.92
ACSS2-223	ENST00000494727	KRTAP5-10	Q6L8G5	202 aa		3.07	□□□□□ -1.92
ACSS2-223	ENST00000494727	SPRR5	A0A1B0GTR4	108 aa		3.05	□□□□□ -1.92
ACSS2-223	ENST00000494727	PMAIP1	Q13794	54 aa		3.05	□□□□□ -1.92
ACSS2-223	ENST00000494727	MT1A	P04731	61 aa		3	□□□□□ -1.93
ACSS2-223	ENST00000494727	KRTAP6-1	Q3LI64	71 aa		3	□□□□□ -1.93
ACSS2-223	ENST00000494727	BRK1	Q8WUW1	75 aa		2.99	□□□□□ -1.93
ACSS2-223	ENST00000494727	LCE1C	Q5T751	118 aa		2.97	□□□□□ -1.93
ACSS2-223	ENST00000494727	LCE1B	Q5T7P3	118 aa		2.97	□□□□□ -1.93
ACSS2-223	ENST00000494727	KRTAP5-7	Q6L8G8	165 aa		2.93	□□□□□ -1.94
ACSS2-223	ENST00000494727	KRTAP5-2	Q701N4	177 aa		2.88	□□□□□ -1.95
ACSS2-223	ENST00000494727	KRTAP6-2	Q3LI66	62 aa		2.86	□□□□□ -1.95
ACSS2-223	ENST00000494727	KTN1-AS1	Q86SY8	53 aa		2.83	□□□□□ -1.96
ACSS2-223	ENST00000494727	KRTAP5-8	O75690	187 aa		2.73	□□□□□ -1.97
ACSS2-223	ENST00000494727	LUZP6	Q538Z0	58 aa		2.69	□□□□□ -1.98
ACSS2-223	ENST00000494727	AHNAK	Q09666	5890 aa	Known RBP	2.6	□□□□□ -1.99
ACSS2-223	ENST00000494727	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.56	□□□□□ -2
ACSS2-223	ENST00000494727	MUC5AC	P98088	5654 aa		2.54	□□□□□ -2
ACSS2-223	ENST00000494727	MUC19	Q7Z5P9	8384 aa		2.35	□□□□□ -2.03
ACSS2-223	ENST00000494727	KRTAP21-2	Q3LI59	83 aa		2.12	□□□□□ -2.07
ACSS2-223	ENST00000494727	INE1	O15225	51 aa		1.98	□□□□□ -2.09
ACSS2-223	ENST00000494727	PHGR1	C9JFL3	82 aa		1.82	□□□□□ -2.12
ACSS2-223	ENST00000494727	PRM1	P04553	51 aa		1.69	□□□□□ -2.14
ACSS2-223	ENST00000494727	KRTAP21-1	Q3LI58	79 aa		1.35	□□□□□ -2.19
ACSS2-223	ENST00000494727	MUC16	Q8WXI7	14507 aa		1.17	□□□□□ -2.22

Retrieved 78 of 20,778 RNA–protein pairs in 64.6 ms