RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
LDHA-211ENST00000494573 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
LDHA-211ENST00000494573 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
LDHA-211ENST00000494573 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
LDHA-211ENST00000494573 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
LDHA-211ENST00000494573 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
LDHA-211ENST00000494573 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
LDHA-211ENST00000494573 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
LDHA-211ENST00000494573 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
LDHA-211ENST00000494573 USH2AO75445 5202 aa4.16□□□□□ -1.74
LDHA-211ENST00000494573 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
LDHA-211ENST00000494573 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
LDHA-211ENST00000494573 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
LDHA-211ENST00000494573 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
LDHA-211ENST00000494573 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
LDHA-211ENST00000494573 MT1EP04732 61 aa3.98□□□□□ -1.77
LDHA-211ENST00000494573 MT3P25713 68 aa3.96□□□□□ -1.78
LDHA-211ENST00000494573 MT1LQ93083 61 aa3.95□□□□□ -1.78
LDHA-211ENST00000494573 KMT2DO14686 5537 aa3.87□□□□□ -1.79
LDHA-211ENST00000494573 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
LDHA-211ENST00000494573 INE1O15225 51 aa3.77□□□□□ -1.81
LDHA-211ENST00000494573 MT1GP13640 62 aa3.76□□□□□ -1.81
LDHA-211ENST00000494573 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
LDHA-211ENST00000494573 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
LDHA-211ENST00000494573 MT1MQ8N339 61 aa3.73□□□□□ -1.81
LDHA-211ENST00000494573 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
LDHA-211ENST00000494573 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
LDHA-211ENST00000494573 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
LDHA-211ENST00000494573 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
LDHA-211ENST00000494573 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.83
LDHA-211ENST00000494573 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
LDHA-211ENST00000494573 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
LDHA-211ENST00000494573 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
LDHA-211ENST00000494573 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
LDHA-211ENST00000494573 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
LDHA-211ENST00000494573 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
LDHA-211ENST00000494573 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
LDHA-211ENST00000494573 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
LDHA-211ENST00000494573 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
LDHA-211ENST00000494573 SPRR2EP22531 72 aa3.41□□□□□ -1.86
LDHA-211ENST00000494573 SPRR2BP35325 72 aa3.41□□□□□ -1.86
LDHA-211ENST00000494573 SPRR2AP35326 72 aa3.41□□□□□ -1.86
LDHA-211ENST00000494573 MT1AP04731 61 aa3.37□□□□□ -1.87
LDHA-211ENST00000494573 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
LDHA-211ENST00000494573 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
LDHA-211ENST00000494573 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
LDHA-211ENST00000494573 SPRR2DP22532 72 aa3.28□□□□□ -1.88
LDHA-211ENST00000494573 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
LDHA-211ENST00000494573 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
LDHA-211ENST00000494573 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
LDHA-211ENST00000494573 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
LDHA-211ENST00000494573 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
LDHA-211ENST00000494573 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
LDHA-211ENST00000494573 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
LDHA-211ENST00000494573 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
LDHA-211ENST00000494573 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
LDHA-211ENST00000494573 NEBP20929 6669 aa2.99□□□□□ -1.93
LDHA-211ENST00000494573 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
LDHA-211ENST00000494573 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
LDHA-211ENST00000494573 MT4P47944 62 aa2.81□□□□□ -1.96
LDHA-211ENST00000494573 PRM1P04553 51 aa2.8□□□□□ -1.96
LDHA-211ENST00000494573 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
LDHA-211ENST00000494573 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
LDHA-211ENST00000494573 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
LDHA-211ENST00000494573 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
LDHA-211ENST00000494573 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
LDHA-211ENST00000494573 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
LDHA-211ENST00000494573 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
LDHA-211ENST00000494573 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
LDHA-211ENST00000494573 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
LDHA-211ENST00000494573 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
LDHA-211ENST00000494573 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
LDHA-211ENST00000494573 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
LDHA-211ENST00000494573 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
LDHA-211ENST00000494573 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
LDHA-211ENST00000494573 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
LDHA-211ENST00000494573 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
LDHA-211ENST00000494573 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms