RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
ATG4B-225ENST00000494465 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
ATG4B-225ENST00000494465 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
ATG4B-225ENST00000494465 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
ATG4B-225ENST00000494465 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
ATG4B-225ENST00000494465 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
ATG4B-225ENST00000494465 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
ATG4B-225ENST00000494465 MT1GP13640 62 aa5.6□□□□□ -1.51
ATG4B-225ENST00000494465 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
ATG4B-225ENST00000494465 MT1MQ8N339 61 aa5.58□□□□□ -1.52
ATG4B-225ENST00000494465 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
ATG4B-225ENST00000494465 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
ATG4B-225ENST00000494465 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
ATG4B-225ENST00000494465 INE1O15225 51 aa5.49□□□□□ -1.53
ATG4B-225ENST00000494465 MDN1Q9NU22 5596 aa5.44□□□□□ -1.54
ATG4B-225ENST00000494465 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
ATG4B-225ENST00000494465 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.55
ATG4B-225ENST00000494465 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
ATG4B-225ENST00000494465 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
ATG4B-225ENST00000494465 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
ATG4B-225ENST00000494465 SPRR2EP22531 72 aa5.31□□□□□ -1.56
ATG4B-225ENST00000494465 SPRR2BP35325 72 aa5.31□□□□□ -1.56
ATG4B-225ENST00000494465 SPRR2AP35326 72 aa5.31□□□□□ -1.56
ATG4B-225ENST00000494465 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
ATG4B-225ENST00000494465 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
ATG4B-225ENST00000494465 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
ATG4B-225ENST00000494465 SPRR2DP22532 72 aa5.11□□□□□ -1.59
ATG4B-225ENST00000494465 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
ATG4B-225ENST00000494465 NEBP20929 6669 aa5.03□□□□□ -1.6
ATG4B-225ENST00000494465 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
ATG4B-225ENST00000494465 MT1AP04731 61 aa4.95□□□□□ -1.62
ATG4B-225ENST00000494465 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
ATG4B-225ENST00000494465 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
ATG4B-225ENST00000494465 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
ATG4B-225ENST00000494465 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
ATG4B-225ENST00000494465 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
ATG4B-225ENST00000494465 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.66
ATG4B-225ENST00000494465 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
ATG4B-225ENST00000494465 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
ATG4B-225ENST00000494465 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
ATG4B-225ENST00000494465 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
ATG4B-225ENST00000494465 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
ATG4B-225ENST00000494465 MT4P47944 62 aa4.46□□□□□ -1.7
ATG4B-225ENST00000494465 MT3P25713 68 aa4.45□□□□□ -1.7
ATG4B-225ENST00000494465 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
ATG4B-225ENST00000494465 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
ATG4B-225ENST00000494465 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
ATG4B-225ENST00000494465 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
ATG4B-225ENST00000494465 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
ATG4B-225ENST00000494465 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
ATG4B-225ENST00000494465 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
ATG4B-225ENST00000494465 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
ATG4B-225ENST00000494465 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
ATG4B-225ENST00000494465 PRM1P04553 51 aa3.9□□□□□ -1.79
ATG4B-225ENST00000494465 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
ATG4B-225ENST00000494465 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
ATG4B-225ENST00000494465 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
ATG4B-225ENST00000494465 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
ATG4B-225ENST00000494465 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
ATG4B-225ENST00000494465 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
ATG4B-225ENST00000494465 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
ATG4B-225ENST00000494465 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
ATG4B-225ENST00000494465 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
ATG4B-225ENST00000494465 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
ATG4B-225ENST00000494465 LCE1CQ5T751 118 aa3.59□□□□□ -1.84
ATG4B-225ENST00000494465 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
ATG4B-225ENST00000494465 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
ATG4B-225ENST00000494465 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
ATG4B-225ENST00000494465 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
ATG4B-225ENST00000494465 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
ATG4B-225ENST00000494465 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
ATG4B-225ENST00000494465 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
ATG4B-225ENST00000494465 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
ATG4B-225ENST00000494465 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
ATG4B-225ENST00000494465 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
ATG4B-225ENST00000494465 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
ATG4B-225ENST00000494465 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
ATG4B-225ENST00000494465 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 147 ms