RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 K7ERS5 55 aa8.49□□□□□ -1.05
CLIC3-203ENST00000494426 A6NED7 52 aa8.48□□□□□ -1.05
CLIC3-203ENST00000494426 MT1GP13640 62 aa8.39□□□□□ -1.07
CLIC3-203ENST00000494426 MT1LQ93083 61 aa8.37□□□□□ -1.07
CLIC3-203ENST00000494426 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
CLIC3-203ENST00000494426 KRTAP12-3P60328 96 aa8.26□□□□□ -1.09
CLIC3-203ENST00000494426 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
CLIC3-203ENST00000494426 MT1MQ8N339 61 aa8.26□□□□□ -1.09
CLIC3-203ENST00000494426 DSTQ03001 7570 aaKnown RBP8.23□□□□□ -1.09
CLIC3-203ENST00000494426 CDC42SE1Q9NRR8 79 aa8.17□□□□□ -1.1
CLIC3-203ENST00000494426 KRTAP4-3Q9BYR4 195 aa8.1□□□□□ -1.11
CLIC3-203ENST00000494426 KRTAP23-1A1A580 65 aa8.08□□□□□ -1.12
CLIC3-203ENST00000494426 KRTAP4-9Q9BYQ8 210 aa8.05□□□□□ -1.12
CLIC3-203ENST00000494426 ROMO1P60602 79 aa8.04□□□□□ -1.12
CLIC3-203ENST00000494426 KRTAP4-7Q9BYR0 210 aa8.02□□□□□ -1.13
CLIC3-203ENST00000494426 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
CLIC3-203ENST00000494426 KRTAP19-4Q3LI73 84 aa7.78□□□□□ -1.16
CLIC3-203ENST00000494426 HMCN1Q96RW7 5635 aa7.78□□□□□ -1.16
CLIC3-203ENST00000494426 AHNAK2Q8IVF2 5795 aa7.76□□□□□ -1.17
CLIC3-203ENST00000494426 LCE4AQ5TA78 99 aa7.75□□□□□ -1.17
CLIC3-203ENST00000494426 LCE1DQ5T752 114 aa7.74□□□□□ -1.17
CLIC3-203ENST00000494426 KRTAP5-4Q6L8H1 288 aa7.72□□□□□ -1.17
CLIC3-203ENST00000494426 KRTAP5-10Q6L8G5 202 aa7.71□□□□□ -1.18
CLIC3-203ENST00000494426 LCE3CQ5T5A8 94 aa7.65□□□□□ -1.18
CLIC3-203ENST00000494426 MT4P47944 62 aa7.63□□□□□ -1.19
CLIC3-203ENST00000494426 BRK1Q8WUW1 75 aa7.6□□□□□ -1.19
CLIC3-203ENST00000494426 LOC100996750A0A140TA64 210 aa7.57□□□□□ -1.2
CLIC3-203ENST00000494426 KRTAP5-5Q701N2 237 aaPredicted RBP7.57□□□□□ -1.2
CLIC3-203ENST00000494426 KRTAP5-7Q6L8G8 165 aa7.56□□□□□ -1.2
CLIC3-203ENST00000494426 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
CLIC3-203ENST00000494426 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
CLIC3-203ENST00000494426 KRTAP5-3Q6L8H2 238 aa7.3□□□□□ -1.24
CLIC3-203ENST00000494426 KRTAP9-6A8MVA2 160 aa7.26□□□□□ -1.25
CLIC3-203ENST00000494426 KRTAP20-2Q3LI61 65 aa7.24□□□□□ -1.25
CLIC3-203ENST00000494426 KRTAP12-4P60329 112 aa7.23□□□□□ -1.25
CLIC3-203ENST00000494426 SYNE1Q8NF91 8797 aaKnown RBP7.21□□□□□ -1.25
CLIC3-203ENST00000494426 PMAIP1Q13794 54 aa7.15□□□□□ -1.26
CLIC3-203ENST00000494426 MT1AP04731 61 aa7.12□□□□□ -1.27
CLIC3-203ENST00000494426 KRTAP6-1Q3LI64 71 aa7.08□□□□□ -1.28
CLIC3-203ENST00000494426 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
CLIC3-203ENST00000494426 PRAC1Q96KF2 57 aa6.88□□□□□ -1.31
CLIC3-203ENST00000494426 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
CLIC3-203ENST00000494426 PRO0628Q9UI54 55 aa6.86□□□□□ -1.31
CLIC3-203ENST00000494426 KRTAP5-2Q701N4 177 aa6.82□□□□□ -1.32
CLIC3-203ENST00000494426 AHNAKQ09666 5890 aaKnown RBP6.72□□□□□ -1.33
CLIC3-203ENST00000494426 KRTAP6-2Q3LI66 62 aa6.69□□□□□ -1.34
CLIC3-203ENST00000494426 MUC5ACP98088 5654 aa6.6□□□□□ -1.35
CLIC3-203ENST00000494426 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
CLIC3-203ENST00000494426 MUC5BQ9HC84 5762 aaPredicted RBP6.52□□□□□ -1.37
CLIC3-203ENST00000494426 KTN1-AS1Q86SY8 53 aa6.49□□□□□ -1.37
CLIC3-203ENST00000494426 MT3P25713 68 aa6.48□□□□□ -1.37
CLIC3-203ENST00000494426 KRTAP5-8O75690 187 aa6.33□□□□□ -1.4
CLIC3-203ENST00000494426 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
CLIC3-203ENST00000494426 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
CLIC3-203ENST00000494426 KRTAP5-1Q6L8H4 278 aa6.06□□□□□ -1.44
CLIC3-203ENST00000494426 LCE1EQ5T753 118 aa5.89□□□□□ -1.47
CLIC3-203ENST00000494426 LUZP6Q538Z0 58 aa5.67□□□□□ -1.5
CLIC3-203ENST00000494426 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
CLIC3-203ENST00000494426 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
CLIC3-203ENST00000494426 LCE1BQ5T7P3 118 aa5.51□□□□□ -1.53
CLIC3-203ENST00000494426 LCE1CQ5T751 118 aa5.47□□□□□ -1.53
CLIC3-203ENST00000494426 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
CLIC3-203ENST00000494426 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
CLIC3-203ENST00000494426 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
CLIC3-203ENST00000494426 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
CLIC3-203ENST00000494426 H3BS24 57 aa4.87□□□□□ -1.63
CLIC3-203ENST00000494426 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
CLIC3-203ENST00000494426 LCE1FQ5T754 118 aa4.7□□□□□ -1.66
CLIC3-203ENST00000494426 KRTAP21-2Q3LI59 83 aa4.67□□□□□ -1.66
CLIC3-203ENST00000494426 PHGR1C9JFL3 82 aa4.54□□□□□ -1.68
CLIC3-203ENST00000494426 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
CLIC3-203ENST00000494426 KRTAP4-4Q9BYR3 166 aa4.23□□□□□ -1.73
CLIC3-203ENST00000494426 PRM1P04553 51 aa4.14□□□□□ -1.75
CLIC3-203ENST00000494426 INE1O15225 51 aa3.9□□□□□ -1.79
CLIC3-203ENST00000494426 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
CLIC3-203ENST00000494426 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
CLIC3-203ENST00000494426 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 16.5 ms