RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
KPNA1-210ENST00000494339 MT1LQ93083 61 aa7.35□□□□□ -1.23
KPNA1-210ENST00000494339 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
KPNA1-210ENST00000494339 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
KPNA1-210ENST00000494339 KRTAP19-3Q7Z4W3 81 aa7.25□□□□□ -1.25
KPNA1-210ENST00000494339 NEBP20929 6669 aa7.22□□□□□ -1.25
KPNA1-210ENST00000494339 LCE3CQ5T5A8 94 aa7.19□□□□□ -1.26
KPNA1-210ENST00000494339 LCE1AQ5T7P2 110 aa7.19□□□□□ -1.26
KPNA1-210ENST00000494339 MT1GP13640 62 aa7.16□□□□□ -1.26
KPNA1-210ENST00000494339 SPRR2EP22531 72 aa7.16□□□□□ -1.26
KPNA1-210ENST00000494339 SPRR2BP35325 72 aa7.16□□□□□ -1.26
KPNA1-210ENST00000494339 SPRR2AP35326 72 aa7.16□□□□□ -1.26
KPNA1-210ENST00000494339 LUZP6Q538Z0 58 aa7.15□□□□□ -1.27
KPNA1-210ENST00000494339 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.27
KPNA1-210ENST00000494339 LCE5AQ5TCM9 118 aa7.14□□□□□ -1.27
KPNA1-210ENST00000494339 MT1MQ8N339 61 aa7.09□□□□□ -1.27
KPNA1-210ENST00000494339 NDUFAF8A1L188 74 aa7□□□□□ -1.29
KPNA1-210ENST00000494339 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
KPNA1-210ENST00000494339 SPRR2DP22532 72 aa6.89□□□□□ -1.31
KPNA1-210ENST00000494339 DSTQ03001 7570 aaKnown RBP6.83□□□□□ -1.32
KPNA1-210ENST00000494339 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
KPNA1-210ENST00000494339 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
KPNA1-210ENST00000494339 KRTAP20-1Q3LI63 56 aa6.7□□□□□ -1.34
KPNA1-210ENST00000494339 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
KPNA1-210ENST00000494339 KRTAP2-3P0C7H8 128 aa6.65□□□□□ -1.34
KPNA1-210ENST00000494339 KRTAP2-4Q9BYR9 128 aa6.65□□□□□ -1.34
KPNA1-210ENST00000494339 KRTAP2-2Q9BYT5 123 aa6.48□□□□□ -1.37
KPNA1-210ENST00000494339 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
KPNA1-210ENST00000494339 KRTAP5-5Q701N2 237 aaPredicted RBP6.39□□□□□ -1.39
KPNA1-210ENST00000494339 H3BS24 57 aa6.27□□□□□ -1.41
KPNA1-210ENST00000494339 MT1AP04731 61 aa6.23□□□□□ -1.41
KPNA1-210ENST00000494339 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
KPNA1-210ENST00000494339 KRTAP6-1Q3LI64 71 aa6.21□□□□□ -1.42
KPNA1-210ENST00000494339 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
KPNA1-210ENST00000494339 KRTAP5-4Q6L8H1 288 aa6.16□□□□□ -1.42
KPNA1-210ENST00000494339 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
KPNA1-210ENST00000494339 MT4P47944 62 aa6.07□□□□□ -1.44
KPNA1-210ENST00000494339 SYNE1Q8NF91 8797 aaKnown RBP6.06□□□□□ -1.44
KPNA1-210ENST00000494339 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
KPNA1-210ENST00000494339 KRTAP4-6Q9BYQ5 205 aa6.01□□□□□ -1.45
KPNA1-210ENST00000494339 HMCN1Q96RW7 5635 aa6.01□□□□□ -1.45
KPNA1-210ENST00000494339 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
KPNA1-210ENST00000494339 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
KPNA1-210ENST00000494339 INE1O15225 51 aa5.82□□□□□ -1.48
KPNA1-210ENST00000494339 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
KPNA1-210ENST00000494339 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
KPNA1-210ENST00000494339 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
KPNA1-210ENST00000494339 MT3P25713 68 aa5.65□□□□□ -1.51
KPNA1-210ENST00000494339 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
KPNA1-210ENST00000494339 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
KPNA1-210ENST00000494339 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
KPNA1-210ENST00000494339 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
KPNA1-210ENST00000494339 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
KPNA1-210ENST00000494339 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
KPNA1-210ENST00000494339 KRTAP5-10Q6L8G5 202 aa5.27□□□□□ -1.57
KPNA1-210ENST00000494339 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
KPNA1-210ENST00000494339 KRTAP5-8O75690 187 aa4.96□□□□□ -1.62
KPNA1-210ENST00000494339 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
KPNA1-210ENST00000494339 LCE1EQ5T753 118 aa4.92□□□□□ -1.62
KPNA1-210ENST00000494339 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
KPNA1-210ENST00000494339 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
KPNA1-210ENST00000494339 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
KPNA1-210ENST00000494339 PRM1P04553 51 aa4.63□□□□□ -1.67
KPNA1-210ENST00000494339 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
KPNA1-210ENST00000494339 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
KPNA1-210ENST00000494339 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
KPNA1-210ENST00000494339 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
KPNA1-210ENST00000494339 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
KPNA1-210ENST00000494339 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
KPNA1-210ENST00000494339 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
KPNA1-210ENST00000494339 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
KPNA1-210ENST00000494339 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
KPNA1-210ENST00000494339 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
KPNA1-210ENST00000494339 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
KPNA1-210ENST00000494339 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
KPNA1-210ENST00000494339 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.89
KPNA1-210ENST00000494339 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
KPNA1-210ENST00000494339 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms