RNA–Protein interactions for RNA: ENST00000494260.2

ARID1B-209, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-209ENST00000494260 TNP1P09430 55 aa4.08□□□□□ -1.76
ARID1B-209ENST00000494260 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
ARID1B-209ENST00000494260 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
ARID1B-209ENST00000494260 MT1MQ8N339 61 aa4.04□□□□□ -1.76
ARID1B-209ENST00000494260 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
ARID1B-209ENST00000494260 MT1LQ93083 61 aa4.02□□□□□ -1.77
ARID1B-209ENST00000494260 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
ARID1B-209ENST00000494260 LCE1DQ5T752 114 aa4□□□□□ -1.77
ARID1B-209ENST00000494260 MT4P47944 62 aa3.99□□□□□ -1.77
ARID1B-209ENST00000494260 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
ARID1B-209ENST00000494260 Q1T7F1 81 aa3.98□□□□□ -1.77
ARID1B-209ENST00000494260 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
ARID1B-209ENST00000494260 PSPHP1O15172 72 aa3.97□□□□□ -1.77
ARID1B-209ENST00000494260 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
ARID1B-209ENST00000494260 UQCR11O14957 56 aa3.92□□□□□ -1.78
ARID1B-209ENST00000494260 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
ARID1B-209ENST00000494260 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
ARID1B-209ENST00000494260 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
ARID1B-209ENST00000494260 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
ARID1B-209ENST00000494260 A6NED7 52 aa3.84□□□□□ -1.79
ARID1B-209ENST00000494260 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
ARID1B-209ENST00000494260 K7ERS5 55 aa3.83□□□□□ -1.8
ARID1B-209ENST00000494260 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
ARID1B-209ENST00000494260 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
ARID1B-209ENST00000494260 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
ARID1B-209ENST00000494260 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
ARID1B-209ENST00000494260 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
ARID1B-209ENST00000494260 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
ARID1B-209ENST00000494260 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
ARID1B-209ENST00000494260 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
ARID1B-209ENST00000494260 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
ARID1B-209ENST00000494260 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
ARID1B-209ENST00000494260 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.83
ARID1B-209ENST00000494260 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
ARID1B-209ENST00000494260 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
ARID1B-209ENST00000494260 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
ARID1B-209ENST00000494260 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
ARID1B-209ENST00000494260 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
ARID1B-209ENST00000494260 KRTAP15-1Q3LI76 137 aa3.62□□□□□ -1.83
ARID1B-209ENST00000494260 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
ARID1B-209ENST00000494260 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
ARID1B-209ENST00000494260 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
ARID1B-209ENST00000494260 ROMO1P60602 79 aa3.52□□□□□ -1.85
ARID1B-209ENST00000494260 MT1AP04731 61 aa3.43□□□□□ -1.86
ARID1B-209ENST00000494260 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
ARID1B-209ENST00000494260 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
ARID1B-209ENST00000494260 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
ARID1B-209ENST00000494260 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
ARID1B-209ENST00000494260 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
ARID1B-209ENST00000494260 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
ARID1B-209ENST00000494260 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
ARID1B-209ENST00000494260 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
ARID1B-209ENST00000494260 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
ARID1B-209ENST00000494260 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
ARID1B-209ENST00000494260 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
ARID1B-209ENST00000494260 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
ARID1B-209ENST00000494260 MT3P25713 68 aa3.17□□□□□ -1.9
ARID1B-209ENST00000494260 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
ARID1B-209ENST00000494260 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
ARID1B-209ENST00000494260 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
ARID1B-209ENST00000494260 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
ARID1B-209ENST00000494260 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
ARID1B-209ENST00000494260 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
ARID1B-209ENST00000494260 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
ARID1B-209ENST00000494260 INE1O15225 51 aa2.58□□□□□ -2
ARID1B-209ENST00000494260 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
ARID1B-209ENST00000494260 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
ARID1B-209ENST00000494260 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
ARID1B-209ENST00000494260 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
ARID1B-209ENST00000494260 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
ARID1B-209ENST00000494260 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
ARID1B-209ENST00000494260 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
ARID1B-209ENST00000494260 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
ARID1B-209ENST00000494260 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
ARID1B-209ENST00000494260 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
ARID1B-209ENST00000494260 PRM1P04553 51 aa1.85□□□□□ -2.11
ARID1B-209ENST00000494260 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
ARID1B-209ENST00000494260 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms