RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 Q1T7F1 81 aa3.5□□□□□ -1.85
UFD1-210ENST00000494054 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
UFD1-210ENST00000494054 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
UFD1-210ENST00000494054 MT1MQ8N339 61 aa3.47□□□□□ -1.85
UFD1-210ENST00000494054 MT1LQ93083 61 aa3.47□□□□□ -1.85
UFD1-210ENST00000494054 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
UFD1-210ENST00000494054 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
UFD1-210ENST00000494054 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
UFD1-210ENST00000494054 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
UFD1-210ENST00000494054 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
UFD1-210ENST00000494054 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
UFD1-210ENST00000494054 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
UFD1-210ENST00000494054 TNP1P09430 55 aa3.42□□□□□ -1.86
UFD1-210ENST00000494054 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
UFD1-210ENST00000494054 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
UFD1-210ENST00000494054 MT4P47944 62 aa3.39□□□□□ -1.87
UFD1-210ENST00000494054 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
UFD1-210ENST00000494054 PSPHP1O15172 72 aa3.38□□□□□ -1.87
UFD1-210ENST00000494054 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
UFD1-210ENST00000494054 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
UFD1-210ENST00000494054 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
UFD1-210ENST00000494054 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
UFD1-210ENST00000494054 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
UFD1-210ENST00000494054 A6NED7 52 aa3.31□□□□□ -1.88
UFD1-210ENST00000494054 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
UFD1-210ENST00000494054 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
UFD1-210ENST00000494054 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
UFD1-210ENST00000494054 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
UFD1-210ENST00000494054 UQCR11O14957 56 aa3.26□□□□□ -1.89
UFD1-210ENST00000494054 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
UFD1-210ENST00000494054 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
UFD1-210ENST00000494054 MIR22HGQ0VDD5 57 aa3.19□□□□□ -1.9
UFD1-210ENST00000494054 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
UFD1-210ENST00000494054 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
UFD1-210ENST00000494054 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
UFD1-210ENST00000494054 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
UFD1-210ENST00000494054 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
UFD1-210ENST00000494054 K7ERS5 55 aa3.11□□□□□ -1.91
UFD1-210ENST00000494054 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
UFD1-210ENST00000494054 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
UFD1-210ENST00000494054 KRTAP15-1Q3LI76 137 aa3.07□□□□□ -1.92
UFD1-210ENST00000494054 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
UFD1-210ENST00000494054 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
UFD1-210ENST00000494054 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
UFD1-210ENST00000494054 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
UFD1-210ENST00000494054 MT1AP04731 61 aa2.95□□□□□ -1.94
UFD1-210ENST00000494054 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
UFD1-210ENST00000494054 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
UFD1-210ENST00000494054 ROMO1P60602 79 aa2.92□□□□□ -1.94
UFD1-210ENST00000494054 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
UFD1-210ENST00000494054 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
UFD1-210ENST00000494054 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
UFD1-210ENST00000494054 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
UFD1-210ENST00000494054 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
UFD1-210ENST00000494054 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
UFD1-210ENST00000494054 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
UFD1-210ENST00000494054 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
UFD1-210ENST00000494054 MT3P25713 68 aa2.69□□□□□ -1.98
UFD1-210ENST00000494054 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
UFD1-210ENST00000494054 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
UFD1-210ENST00000494054 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
UFD1-210ENST00000494054 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
UFD1-210ENST00000494054 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
UFD1-210ENST00000494054 INE1O15225 51 aa2.34□□□□□ -2.03
UFD1-210ENST00000494054 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
UFD1-210ENST00000494054 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
UFD1-210ENST00000494054 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
UFD1-210ENST00000494054 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
UFD1-210ENST00000494054 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
UFD1-210ENST00000494054 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
UFD1-210ENST00000494054 LCE3EQ5T5B0 92 aa2.04□□□□□ -2.08
UFD1-210ENST00000494054 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
UFD1-210ENST00000494054 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
UFD1-210ENST00000494054 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
UFD1-210ENST00000494054 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
UFD1-210ENST00000494054 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
UFD1-210ENST00000494054 PRM1P04553 51 aa1.5□□□□□ -2.17
UFD1-210ENST00000494054 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 105 ms