RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
RFC2-211ENST00000494019 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
RFC2-211ENST00000494019 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
RFC2-211ENST00000494019 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
RFC2-211ENST00000494019 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
RFC2-211ENST00000494019 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
RFC2-211ENST00000494019 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
RFC2-211ENST00000494019 ROMO1P60602 79 aa3.62□□□□□ -1.83
RFC2-211ENST00000494019 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
RFC2-211ENST00000494019 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
RFC2-211ENST00000494019 MT1LQ93083 61 aa3.61□□□□□ -1.83
RFC2-211ENST00000494019 H3BS24 57 aa3.6□□□□□ -1.83
RFC2-211ENST00000494019 MT1GP13640 62 aa3.6□□□□□ -1.83
RFC2-211ENST00000494019 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
RFC2-211ENST00000494019 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
RFC2-211ENST00000494019 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
RFC2-211ENST00000494019 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
RFC2-211ENST00000494019 MT1MQ8N339 61 aa3.56□□□□□ -1.84
RFC2-211ENST00000494019 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
RFC2-211ENST00000494019 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
RFC2-211ENST00000494019 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
RFC2-211ENST00000494019 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.86
RFC2-211ENST00000494019 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
RFC2-211ENST00000494019 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
RFC2-211ENST00000494019 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
RFC2-211ENST00000494019 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.87
RFC2-211ENST00000494019 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
RFC2-211ENST00000494019 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
RFC2-211ENST00000494019 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
RFC2-211ENST00000494019 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
RFC2-211ENST00000494019 MT4P47944 62 aa3.26□□□□□ -1.89
RFC2-211ENST00000494019 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
RFC2-211ENST00000494019 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
RFC2-211ENST00000494019 PRO0628Q9UI54 55 aa3.23□□□□□ -1.89
RFC2-211ENST00000494019 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
RFC2-211ENST00000494019 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
RFC2-211ENST00000494019 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
RFC2-211ENST00000494019 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
RFC2-211ENST00000494019 MT1AP04731 61 aa3.08□□□□□ -1.92
RFC2-211ENST00000494019 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
RFC2-211ENST00000494019 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
RFC2-211ENST00000494019 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
RFC2-211ENST00000494019 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
RFC2-211ENST00000494019 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
RFC2-211ENST00000494019 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
RFC2-211ENST00000494019 SVIPQ8NHG7 77 aa2.96□□□□□ -1.94
RFC2-211ENST00000494019 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
RFC2-211ENST00000494019 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
RFC2-211ENST00000494019 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
RFC2-211ENST00000494019 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
RFC2-211ENST00000494019 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
RFC2-211ENST00000494019 MT3P25713 68 aa2.8□□□□□ -1.96
RFC2-211ENST00000494019 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
RFC2-211ENST00000494019 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
RFC2-211ENST00000494019 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
RFC2-211ENST00000494019 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
RFC2-211ENST00000494019 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
RFC2-211ENST00000494019 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
RFC2-211ENST00000494019 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
RFC2-211ENST00000494019 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
RFC2-211ENST00000494019 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
RFC2-211ENST00000494019 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
RFC2-211ENST00000494019 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
RFC2-211ENST00000494019 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
RFC2-211ENST00000494019 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
RFC2-211ENST00000494019 NDUFAF8A1L188 74 aa2.31□□□□□ -2.04
RFC2-211ENST00000494019 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
RFC2-211ENST00000494019 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
RFC2-211ENST00000494019 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
RFC2-211ENST00000494019 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
RFC2-211ENST00000494019 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
RFC2-211ENST00000494019 PRM1P04553 51 aa1.88□□□□□ -2.11
RFC2-211ENST00000494019 INE1O15225 51 aa1.87□□□□□ -2.11
RFC2-211ENST00000494019 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
RFC2-211ENST00000494019 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
RFC2-211ENST00000494019 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
RFC2-211ENST00000494019 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
RFC2-211ENST00000494019 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 52.1 ms