RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 A0A0D9SG42 100 aa2.81□□□□□ -1.96
CPSF7-213ENST00000494016 FLGP20930 4061 aaPredicted RBP2.81□□□□□ -1.96
CPSF7-213ENST00000494016 M0QZ58 72 aa2.79□□□□□ -1.96
CPSF7-213ENST00000494016 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
CPSF7-213ENST00000494016 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
CPSF7-213ENST00000494016 MT1HP80294 61 aa2.74□□□□□ -1.97
CPSF7-213ENST00000494016 SSPOA2VEC9 5147 aa2.71□□□□□ -1.98
CPSF7-213ENST00000494016 LCE3AQ5TA76 89 aa2.7□□□□□ -1.98
CPSF7-213ENST00000494016 CRIPTQ9P021 101 aa2.7□□□□□ -1.98
CPSF7-213ENST00000494016 USH2AO75445 5202 aa2.68□□□□□ -1.98
CPSF7-213ENST00000494016 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
CPSF7-213ENST00000494016 M0R2T5 61 aa2.65□□□□□ -1.99
CPSF7-213ENST00000494016 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
CPSF7-213ENST00000494016 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
CPSF7-213ENST00000494016 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
CPSF7-213ENST00000494016 MT2AP02795 61 aa2.61□□□□□ -1.99
CPSF7-213ENST00000494016 SPRR2GQ9BYE4 73 aa2.61□□□□□ -1.99
CPSF7-213ENST00000494016 INE1O15225 51 aa2.6□□□□□ -1.99
CPSF7-213ENST00000494016 MT1FP04733 61 aa2.59□□□□□ -1.99
CPSF7-213ENST00000494016 KRTAP5-8O75690 187 aa2.58□□□□□ -2
CPSF7-213ENST00000494016 KRTAP10-10P60014 251 aa2.56□□□□□ -2
CPSF7-213ENST00000494016 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
CPSF7-213ENST00000494016 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
CPSF7-213ENST00000494016 MT1BP07438 61 aa2.5□□□□□ -2.01
CPSF7-213ENST00000494016 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
CPSF7-213ENST00000494016 NEBP20929 6669 aa2.49□□□□□ -2.01
CPSF7-213ENST00000494016 TNP1P09430 55 aa2.47□□□□□ -2.01
CPSF7-213ENST00000494016 KRTAP20-1Q3LI63 56 aa2.46□□□□□ -2.02
CPSF7-213ENST00000494016 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
CPSF7-213ENST00000494016 MT1XP80297 61 aa2.44□□□□□ -2.02
CPSF7-213ENST00000494016 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
CPSF7-213ENST00000494016 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
CPSF7-213ENST00000494016 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
CPSF7-213ENST00000494016 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CPSF7-213ENST00000494016 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
CPSF7-213ENST00000494016 KMT2DO14686 5537 aa2.37□□□□□ -2.03
CPSF7-213ENST00000494016 KRTAP8-1Q8IUC2 63 aa2.34□□□□□ -2.03
CPSF7-213ENST00000494016 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
CPSF7-213ENST00000494016 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
CPSF7-213ENST00000494016 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
CPSF7-213ENST00000494016 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
CPSF7-213ENST00000494016 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
CPSF7-213ENST00000494016 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
CPSF7-213ENST00000494016 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
CPSF7-213ENST00000494016 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
CPSF7-213ENST00000494016 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
CPSF7-213ENST00000494016 SPRR2EP22531 72 aa2.19□□□□□ -2.06
CPSF7-213ENST00000494016 SPRR2BP35325 72 aa2.19□□□□□ -2.06
CPSF7-213ENST00000494016 SPRR2AP35326 72 aa2.19□□□□□ -2.06
CPSF7-213ENST00000494016 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
CPSF7-213ENST00000494016 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.07
CPSF7-213ENST00000494016 MT1EP04732 61 aa2.12□□□□□ -2.07
CPSF7-213ENST00000494016 SPRR2DP22532 72 aa2.12□□□□□ -2.07
CPSF7-213ENST00000494016 MT1LQ93083 61 aa2.1□□□□□ -2.07
CPSF7-213ENST00000494016 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
CPSF7-213ENST00000494016 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
CPSF7-213ENST00000494016 MT1GP13640 62 aa2□□□□□ -2.09
CPSF7-213ENST00000494016 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
CPSF7-213ENST00000494016 MT1MQ8N339 61 aa1.99□□□□□ -2.09
CPSF7-213ENST00000494016 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
CPSF7-213ENST00000494016 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
CPSF7-213ENST00000494016 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
CPSF7-213ENST00000494016 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
CPSF7-213ENST00000494016 MT4P47944 62 aa1.88□□□□□ -2.11
CPSF7-213ENST00000494016 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
CPSF7-213ENST00000494016 MT1AP04731 61 aa1.78□□□□□ -2.12
CPSF7-213ENST00000494016 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
CPSF7-213ENST00000494016 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CPSF7-213ENST00000494016 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
CPSF7-213ENST00000494016 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.13
CPSF7-213ENST00000494016 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
CPSF7-213ENST00000494016 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
CPSF7-213ENST00000494016 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
CPSF7-213ENST00000494016 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
CPSF7-213ENST00000494016 PRM1P04553 51 aa1.45□□□□□ -2.18
CPSF7-213ENST00000494016 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
CPSF7-213ENST00000494016 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
CPSF7-213ENST00000494016 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 20.1 ms