RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 SMIM26A0A096LP01 95 aa4.53□□□□□ -1.68
UBA3-211ENST00000493957 PRR15LQ9BU68 103 aa4.53□□□□□ -1.68
UBA3-211ENST00000493957 SPRR2EP22531 72 aa4.52□□□□□ -1.69
UBA3-211ENST00000493957 SPRR2BP35325 72 aa4.52□□□□□ -1.69
UBA3-211ENST00000493957 SPRR2AP35326 72 aa4.52□□□□□ -1.69
UBA3-211ENST00000493957 PCP4P48539 62 aa4.46□□□□□ -1.7
UBA3-211ENST00000493957 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
UBA3-211ENST00000493957 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
UBA3-211ENST00000493957 UQCR11O14957 56 aa4.4□□□□□ -1.71
UBA3-211ENST00000493957 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
UBA3-211ENST00000493957 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
UBA3-211ENST00000493957 PSPHP1O15172 72 aa4.38□□□□□ -1.71
UBA3-211ENST00000493957 SPRR2DP22532 72 aa4.36□□□□□ -1.71
UBA3-211ENST00000493957 Q1T7F1 81 aa4.36□□□□□ -1.71
UBA3-211ENST00000493957 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
UBA3-211ENST00000493957 MT1EP04732 61 aa4.34□□□□□ -1.71
UBA3-211ENST00000493957 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
UBA3-211ENST00000493957 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
UBA3-211ENST00000493957 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
UBA3-211ENST00000493957 V9GYY9 64 aa4.33□□□□□ -1.72
UBA3-211ENST00000493957 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
UBA3-211ENST00000493957 LCE3AQ5TA76 89 aa4.3□□□□□ -1.72
UBA3-211ENST00000493957 TNP1P09430 55 aa4.29□□□□□ -1.72
UBA3-211ENST00000493957 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
UBA3-211ENST00000493957 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
UBA3-211ENST00000493957 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
UBA3-211ENST00000493957 A6NED7 52 aa4.21□□□□□ -1.74
UBA3-211ENST00000493957 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
UBA3-211ENST00000493957 K7ERS5 55 aa4.17□□□□□ -1.74
UBA3-211ENST00000493957 MT1LQ93083 61 aa4.17□□□□□ -1.74
UBA3-211ENST00000493957 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
UBA3-211ENST00000493957 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
UBA3-211ENST00000493957 MT1GP13640 62 aa4.13□□□□□ -1.75
UBA3-211ENST00000493957 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
UBA3-211ENST00000493957 MT1MQ8N339 61 aa4.12□□□□□ -1.75
UBA3-211ENST00000493957 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
UBA3-211ENST00000493957 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
UBA3-211ENST00000493957 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
UBA3-211ENST00000493957 CDC42SE1Q9NRR8 79 aa4.04□□□□□ -1.76
UBA3-211ENST00000493957 ROMO1P60602 79 aa3.97□□□□□ -1.77
UBA3-211ENST00000493957 MT4P47944 62 aa3.82□□□□□ -1.8
UBA3-211ENST00000493957 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
UBA3-211ENST00000493957 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
UBA3-211ENST00000493957 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
UBA3-211ENST00000493957 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
UBA3-211ENST00000493957 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
UBA3-211ENST00000493957 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
UBA3-211ENST00000493957 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
UBA3-211ENST00000493957 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
UBA3-211ENST00000493957 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
UBA3-211ENST00000493957 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
UBA3-211ENST00000493957 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
UBA3-211ENST00000493957 MT1AP04731 61 aa3.54□□□□□ -1.84
UBA3-211ENST00000493957 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
UBA3-211ENST00000493957 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
UBA3-211ENST00000493957 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
UBA3-211ENST00000493957 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
UBA3-211ENST00000493957 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
UBA3-211ENST00000493957 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
UBA3-211ENST00000493957 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
UBA3-211ENST00000493957 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
UBA3-211ENST00000493957 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
UBA3-211ENST00000493957 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
UBA3-211ENST00000493957 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
UBA3-211ENST00000493957 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
UBA3-211ENST00000493957 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
UBA3-211ENST00000493957 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
UBA3-211ENST00000493957 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
UBA3-211ENST00000493957 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
UBA3-211ENST00000493957 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
UBA3-211ENST00000493957 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
UBA3-211ENST00000493957 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
UBA3-211ENST00000493957 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
UBA3-211ENST00000493957 INE1O15225 51 aa2.36□□□□□ -2.03
UBA3-211ENST00000493957 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
UBA3-211ENST00000493957 PRM1P04553 51 aa2.07□□□□□ -2.08
UBA3-211ENST00000493957 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
UBA3-211ENST00000493957 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 106.5 ms