RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
SATB1-217ENST00000493952 K7ERS5 55 aa5.72□□□□□ -1.49
SATB1-217ENST00000493952 MT1MQ8N339 61 aa5.72□□□□□ -1.49
SATB1-217ENST00000493952 PCP4P48539 62 aa5.7□□□□□ -1.5
SATB1-217ENST00000493952 A6NED7 52 aa5.66□□□□□ -1.5
SATB1-217ENST00000493952 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
SATB1-217ENST00000493952 KRTAP12-3P60328 96 aa5.65□□□□□ -1.5
SATB1-217ENST00000493952 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
SATB1-217ENST00000493952 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
SATB1-217ENST00000493952 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
SATB1-217ENST00000493952 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
SATB1-217ENST00000493952 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
SATB1-217ENST00000493952 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
SATB1-217ENST00000493952 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
SATB1-217ENST00000493952 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
SATB1-217ENST00000493952 ROMO1P60602 79 aa5.38□□□□□ -1.55
SATB1-217ENST00000493952 MT4P47944 62 aa5.37□□□□□ -1.55
SATB1-217ENST00000493952 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
SATB1-217ENST00000493952 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
SATB1-217ENST00000493952 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
SATB1-217ENST00000493952 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
SATB1-217ENST00000493952 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
SATB1-217ENST00000493952 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
SATB1-217ENST00000493952 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
SATB1-217ENST00000493952 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
SATB1-217ENST00000493952 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
SATB1-217ENST00000493952 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
SATB1-217ENST00000493952 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
SATB1-217ENST00000493952 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
SATB1-217ENST00000493952 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
SATB1-217ENST00000493952 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
SATB1-217ENST00000493952 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
SATB1-217ENST00000493952 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
SATB1-217ENST00000493952 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
SATB1-217ENST00000493952 MT1AP04731 61 aa4.91□□□□□ -1.62
SATB1-217ENST00000493952 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
SATB1-217ENST00000493952 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
SATB1-217ENST00000493952 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
SATB1-217ENST00000493952 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
SATB1-217ENST00000493952 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
SATB1-217ENST00000493952 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
SATB1-217ENST00000493952 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
SATB1-217ENST00000493952 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
SATB1-217ENST00000493952 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
SATB1-217ENST00000493952 MT3P25713 68 aa4.46□□□□□ -1.7
SATB1-217ENST00000493952 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
SATB1-217ENST00000493952 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
SATB1-217ENST00000493952 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
SATB1-217ENST00000493952 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
SATB1-217ENST00000493952 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
SATB1-217ENST00000493952 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
SATB1-217ENST00000493952 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
SATB1-217ENST00000493952 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
SATB1-217ENST00000493952 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
SATB1-217ENST00000493952 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
SATB1-217ENST00000493952 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
SATB1-217ENST00000493952 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
SATB1-217ENST00000493952 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
SATB1-217ENST00000493952 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
SATB1-217ENST00000493952 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
SATB1-217ENST00000493952 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
SATB1-217ENST00000493952 H3BS24 57 aa3.74□□□□□ -1.81
SATB1-217ENST00000493952 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
SATB1-217ENST00000493952 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
SATB1-217ENST00000493952 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
SATB1-217ENST00000493952 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
SATB1-217ENST00000493952 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
SATB1-217ENST00000493952 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
SATB1-217ENST00000493952 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
SATB1-217ENST00000493952 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
SATB1-217ENST00000493952 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SATB1-217ENST00000493952 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
SATB1-217ENST00000493952 PRM1P04553 51 aa2.78□□□□□ -1.96
SATB1-217ENST00000493952 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
SATB1-217ENST00000493952 INE1O15225 51 aa2.49□□□□□ -2.01
SATB1-217ENST00000493952 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
SATB1-217ENST00000493952 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 168.8 ms