RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
NPHP3-209ENST00000493732 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
NPHP3-209ENST00000493732 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
NPHP3-209ENST00000493732 INE1O15225 51 aa3.72□□□□□ -1.81
NPHP3-209ENST00000493732 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
NPHP3-209ENST00000493732 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
NPHP3-209ENST00000493732 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
NPHP3-209ENST00000493732 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
NPHP3-209ENST00000493732 USH2AO75445 5202 aa3.5□□□□□ -1.85
NPHP3-209ENST00000493732 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
NPHP3-209ENST00000493732 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
NPHP3-209ENST00000493732 MT1EP04732 61 aa3.38□□□□□ -1.87
NPHP3-209ENST00000493732 MT1LQ93083 61 aa3.37□□□□□ -1.87
NPHP3-209ENST00000493732 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
NPHP3-209ENST00000493732 KMT2DO14686 5537 aa3.36□□□□□ -1.87
NPHP3-209ENST00000493732 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
NPHP3-209ENST00000493732 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
NPHP3-209ENST00000493732 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
NPHP3-209ENST00000493732 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
NPHP3-209ENST00000493732 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
NPHP3-209ENST00000493732 MT1GP13640 62 aa3.23□□□□□ -1.89
NPHP3-209ENST00000493732 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
NPHP3-209ENST00000493732 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
NPHP3-209ENST00000493732 MT1MQ8N339 61 aa3.17□□□□□ -1.9
NPHP3-209ENST00000493732 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
NPHP3-209ENST00000493732 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
NPHP3-209ENST00000493732 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
NPHP3-209ENST00000493732 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
NPHP3-209ENST00000493732 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
NPHP3-209ENST00000493732 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
NPHP3-209ENST00000493732 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
NPHP3-209ENST00000493732 MUC12Q9UKN1 5478 aa3.01□□□□□ -1.93
NPHP3-209ENST00000493732 CRCT1Q9UGL9 99 aa2.97□□□□□ -1.93
NPHP3-209ENST00000493732 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
NPHP3-209ENST00000493732 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
NPHP3-209ENST00000493732 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
NPHP3-209ENST00000493732 MT1AP04731 61 aa2.88□□□□□ -1.95
NPHP3-209ENST00000493732 MT3P25713 68 aa2.85□□□□□ -1.95
NPHP3-209ENST00000493732 SPRR2EP22531 72 aa2.85□□□□□ -1.95
NPHP3-209ENST00000493732 SPRR2BP35325 72 aa2.85□□□□□ -1.95
NPHP3-209ENST00000493732 SPRR2AP35326 72 aa2.85□□□□□ -1.95
NPHP3-209ENST00000493732 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
NPHP3-209ENST00000493732 DSTQ03001 7570 aaKnown RBP2.82□□□□□ -1.96
NPHP3-209ENST00000493732 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
NPHP3-209ENST00000493732 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
NPHP3-209ENST00000493732 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
NPHP3-209ENST00000493732 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
NPHP3-209ENST00000493732 LCE1FQ5T754 118 aa2.78□□□□□ -1.97
NPHP3-209ENST00000493732 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
NPHP3-209ENST00000493732 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
NPHP3-209ENST00000493732 SPRR2DP22532 72 aa2.75□□□□□ -1.97
NPHP3-209ENST00000493732 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
NPHP3-209ENST00000493732 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
NPHP3-209ENST00000493732 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
NPHP3-209ENST00000493732 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
NPHP3-209ENST00000493732 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
NPHP3-209ENST00000493732 LCE1EQ5T753 118 aa2.56□□□□□ -2
NPHP3-209ENST00000493732 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
NPHP3-209ENST00000493732 PRM1P04553 51 aa2.47□□□□□ -2.01
NPHP3-209ENST00000493732 NEBP20929 6669 aa2.46□□□□□ -2.02
NPHP3-209ENST00000493732 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
NPHP3-209ENST00000493732 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
NPHP3-209ENST00000493732 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
NPHP3-209ENST00000493732 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
NPHP3-209ENST00000493732 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
NPHP3-209ENST00000493732 MT4P47944 62 aa2.35□□□□□ -2.03
NPHP3-209ENST00000493732 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
NPHP3-209ENST00000493732 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
NPHP3-209ENST00000493732 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
NPHP3-209ENST00000493732 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
NPHP3-209ENST00000493732 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
NPHP3-209ENST00000493732 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
NPHP3-209ENST00000493732 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
NPHP3-209ENST00000493732 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
NPHP3-209ENST00000493732 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
NPHP3-209ENST00000493732 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
NPHP3-209ENST00000493732 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
NPHP3-209ENST00000493732 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 9 ms