RNA–Protein interactions for RNA: ENST00000493724.1

CDC45-212, Transcript of cell division cycle 45, humanhuman

TSL 2

Gene CDC45, Length 469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-212ENST00000493724 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
CDC45-212ENST00000493724 RPS28P62857 69 aaKnown RBP4.8□□□□□ -1.64
CDC45-212ENST00000493724 K7ERS5 55 aa4.78□□□□□ -1.64
CDC45-212ENST00000493724 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
CDC45-212ENST00000493724 A6NED7 52 aa4.77□□□□□ -1.65
CDC45-212ENST00000493724 MT1GP13640 62 aa4.7□□□□□ -1.66
CDC45-212ENST00000493724 MT1LQ93083 61 aa4.69□□□□□ -1.66
CDC45-212ENST00000493724 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
CDC45-212ENST00000493724 MT1MQ8N339 61 aa4.66□□□□□ -1.66
CDC45-212ENST00000493724 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
CDC45-212ENST00000493724 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
CDC45-212ENST00000493724 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
CDC45-212ENST00000493724 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
CDC45-212ENST00000493724 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
CDC45-212ENST00000493724 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
CDC45-212ENST00000493724 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
CDC45-212ENST00000493724 ROMO1P60602 79 aa4.48□□□□□ -1.69
CDC45-212ENST00000493724 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
CDC45-212ENST00000493724 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
CDC45-212ENST00000493724 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
CDC45-212ENST00000493724 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
CDC45-212ENST00000493724 MT4P47944 62 aa4.42□□□□□ -1.7
CDC45-212ENST00000493724 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
CDC45-212ENST00000493724 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
CDC45-212ENST00000493724 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
CDC45-212ENST00000493724 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
CDC45-212ENST00000493724 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
CDC45-212ENST00000493724 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
CDC45-212ENST00000493724 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
CDC45-212ENST00000493724 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
CDC45-212ENST00000493724 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
CDC45-212ENST00000493724 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
CDC45-212ENST00000493724 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
CDC45-212ENST00000493724 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
CDC45-212ENST00000493724 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
CDC45-212ENST00000493724 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
CDC45-212ENST00000493724 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
CDC45-212ENST00000493724 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
CDC45-212ENST00000493724 MT1AP04731 61 aa3.98□□□□□ -1.77
CDC45-212ENST00000493724 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
CDC45-212ENST00000493724 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
CDC45-212ENST00000493724 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
CDC45-212ENST00000493724 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
CDC45-212ENST00000493724 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
CDC45-212ENST00000493724 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
CDC45-212ENST00000493724 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
CDC45-212ENST00000493724 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
CDC45-212ENST00000493724 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
CDC45-212ENST00000493724 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
CDC45-212ENST00000493724 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
CDC45-212ENST00000493724 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
CDC45-212ENST00000493724 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
CDC45-212ENST00000493724 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
CDC45-212ENST00000493724 MT3P25713 68 aa3.62□□□□□ -1.83
CDC45-212ENST00000493724 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
CDC45-212ENST00000493724 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
CDC45-212ENST00000493724 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
CDC45-212ENST00000493724 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
CDC45-212ENST00000493724 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
CDC45-212ENST00000493724 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
CDC45-212ENST00000493724 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CDC45-212ENST00000493724 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
CDC45-212ENST00000493724 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CDC45-212ENST00000493724 H3BS24 57 aa3.05□□□□□ -1.92
CDC45-212ENST00000493724 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
CDC45-212ENST00000493724 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
CDC45-212ENST00000493724 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
CDC45-212ENST00000493724 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
CDC45-212ENST00000493724 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
CDC45-212ENST00000493724 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
CDC45-212ENST00000493724 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
CDC45-212ENST00000493724 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
CDC45-212ENST00000493724 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
CDC45-212ENST00000493724 PRM1P04553 51 aa2.32□□□□□ -2.04
CDC45-212ENST00000493724 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
CDC45-212ENST00000493724 INE1O15225 51 aa2.2□□□□□ -2.06
CDC45-212ENST00000493724 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
CDC45-212ENST00000493724 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 95.7 ms