RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ANAPC13Q9BS18 74 aa6.16□□□□□ -1.42
COL9A1-210ENST00000493682 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.42
COL9A1-210ENST00000493682 MT1LQ93083 61 aa6.15□□□□□ -1.42
COL9A1-210ENST00000493682 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
COL9A1-210ENST00000493682 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
COL9A1-210ENST00000493682 KRTAP5-10Q6L8G5 202 aa6.1□□□□□ -1.43
COL9A1-210ENST00000493682 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
COL9A1-210ENST00000493682 SEC61GP60059 68 aa6.09□□□□□ -1.43
COL9A1-210ENST00000493682 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
COL9A1-210ENST00000493682 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.43
COL9A1-210ENST00000493682 COA5Q86WW8 74 aa6.08□□□□□ -1.44
COL9A1-210ENST00000493682 A0A1B0GU33 70 aa6.04□□□□□ -1.44
COL9A1-210ENST00000493682 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
COL9A1-210ENST00000493682 H7BZZ5 65 aa6.01□□□□□ -1.45
COL9A1-210ENST00000493682 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
COL9A1-210ENST00000493682 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
COL9A1-210ENST00000493682 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
COL9A1-210ENST00000493682 TNP1P09430 55 aa5.88□□□□□ -1.47
COL9A1-210ENST00000493682 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
COL9A1-210ENST00000493682 A8MU10 97 aa5.84□□□□□ -1.47
COL9A1-210ENST00000493682 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
COL9A1-210ENST00000493682 TMEM258P61165 79 aa5.82□□□□□ -1.48
COL9A1-210ENST00000493682 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
COL9A1-210ENST00000493682 A0A1B0GU69 56 aa5.77□□□□□ -1.49
COL9A1-210ENST00000493682 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
COL9A1-210ENST00000493682 KRTAP5-5Q701N2 237 aaPredicted RBP5.73□□□□□ -1.49
COL9A1-210ENST00000493682 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
COL9A1-210ENST00000493682 MT3P25713 68 aa5.71□□□□□ -1.5
COL9A1-210ENST00000493682 KRTAP12-4P60329 112 aa5.65□□□□□ -1.5
COL9A1-210ENST00000493682 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.58□□□□□ -1.52
COL9A1-210ENST00000493682 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
COL9A1-210ENST00000493682 RPS28P62857 69 aaKnown RBP5.53□□□□□ -1.52
COL9A1-210ENST00000493682 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
COL9A1-210ENST00000493682 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
COL9A1-210ENST00000493682 KRTAP5-11Q6L8G4 156 aa5.45□□□□□ -1.54
COL9A1-210ENST00000493682 Q1T7F1 81 aa5.44□□□□□ -1.54
COL9A1-210ENST00000493682 V9GYY9 64 aa5.44□□□□□ -1.54
COL9A1-210ENST00000493682 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
COL9A1-210ENST00000493682 PSPHP1O15172 72 aa5.33□□□□□ -1.56
COL9A1-210ENST00000493682 UQCR11O14957 56 aa5.3□□□□□ -1.56
COL9A1-210ENST00000493682 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
COL9A1-210ENST00000493682 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
COL9A1-210ENST00000493682 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
COL9A1-210ENST00000493682 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
COL9A1-210ENST00000493682 MT1AP04731 61 aa5.22□□□□□ -1.57
COL9A1-210ENST00000493682 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
COL9A1-210ENST00000493682 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
COL9A1-210ENST00000493682 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
COL9A1-210ENST00000493682 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
COL9A1-210ENST00000493682 A6NED7 52 aa5.17□□□□□ -1.58
COL9A1-210ENST00000493682 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
COL9A1-210ENST00000493682 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
COL9A1-210ENST00000493682 LCE1FQ5T754 118 aa5.12□□□□□ -1.59
COL9A1-210ENST00000493682 K7ERS5 55 aa5.11□□□□□ -1.59
COL9A1-210ENST00000493682 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
COL9A1-210ENST00000493682 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
COL9A1-210ENST00000493682 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
COL9A1-210ENST00000493682 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
COL9A1-210ENST00000493682 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
COL9A1-210ENST00000493682 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
COL9A1-210ENST00000493682 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
COL9A1-210ENST00000493682 ROMO1P60602 79 aa4.78□□□□□ -1.64
COL9A1-210ENST00000493682 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
COL9A1-210ENST00000493682 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
COL9A1-210ENST00000493682 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
COL9A1-210ENST00000493682 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
COL9A1-210ENST00000493682 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
COL9A1-210ENST00000493682 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
COL9A1-210ENST00000493682 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
COL9A1-210ENST00000493682 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
COL9A1-210ENST00000493682 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
COL9A1-210ENST00000493682 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
COL9A1-210ENST00000493682 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
COL9A1-210ENST00000493682 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
COL9A1-210ENST00000493682 INE1O15225 51 aa2.73□□□□□ -1.97
COL9A1-210ENST00000493682 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
COL9A1-210ENST00000493682 PRM1P04553 51 aa2.46□□□□□ -2.02
COL9A1-210ENST00000493682 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 65.9 ms