RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 CRCT1Q9UGL9 99 aa2.69□□□□□ -1.98
RBM39-237ENST00000492779 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
RBM39-237ENST00000492779 TNP1P09430 55 aa2.67□□□□□ -1.98
RBM39-237ENST00000492779 LCE4AQ5TA78 99 aa2.65□□□□□ -1.99
RBM39-237ENST00000492779 MT1XP80297 61 aa2.63□□□□□ -1.99
RBM39-237ENST00000492779 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
RBM39-237ENST00000492779 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
RBM39-237ENST00000492779 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
RBM39-237ENST00000492779 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
RBM39-237ENST00000492779 KRTAP10-7P60409 375 aaPredicted RBP2.58□□□□□ -2
RBM39-237ENST00000492779 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
RBM39-237ENST00000492779 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
RBM39-237ENST00000492779 LCE1FQ5T754 118 aa2.56□□□□□ -2
RBM39-237ENST00000492779 MDN1Q9NU22 5596 aa2.55□□□□□ -2
RBM39-237ENST00000492779 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
RBM39-237ENST00000492779 MT3P25713 68 aa2.53□□□□□ -2
RBM39-237ENST00000492779 LCE1AQ5T7P2 110 aa2.53□□□□□ -2
RBM39-237ENST00000492779 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
RBM39-237ENST00000492779 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
RBM39-237ENST00000492779 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
RBM39-237ENST00000492779 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
RBM39-237ENST00000492779 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
RBM39-237ENST00000492779 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
RBM39-237ENST00000492779 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
RBM39-237ENST00000492779 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
RBM39-237ENST00000492779 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
RBM39-237ENST00000492779 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
RBM39-237ENST00000492779 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
RBM39-237ENST00000492779 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
RBM39-237ENST00000492779 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
RBM39-237ENST00000492779 NEBP20929 6669 aa2.32□□□□□ -2.04
RBM39-237ENST00000492779 MT1EP04732 61 aa2.29□□□□□ -2.04
RBM39-237ENST00000492779 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
RBM39-237ENST00000492779 SPRR2EP22531 72 aa2.26□□□□□ -2.05
RBM39-237ENST00000492779 SPRR2BP35325 72 aa2.26□□□□□ -2.05
RBM39-237ENST00000492779 SPRR2AP35326 72 aa2.26□□□□□ -2.05
RBM39-237ENST00000492779 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
RBM39-237ENST00000492779 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
RBM39-237ENST00000492779 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
RBM39-237ENST00000492779 MT1LQ93083 61 aa2.23□□□□□ -2.05
RBM39-237ENST00000492779 KRTAP19-3Q7Z4W3 81 aa2.22□□□□□ -2.05
RBM39-237ENST00000492779 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
RBM39-237ENST00000492779 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
RBM39-237ENST00000492779 SPRR2DP22532 72 aa2.18□□□□□ -2.06
RBM39-237ENST00000492779 MT1MQ8N339 61 aa2.17□□□□□ -2.06
RBM39-237ENST00000492779 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
RBM39-237ENST00000492779 MT1GP13640 62 aa2.16□□□□□ -2.06
RBM39-237ENST00000492779 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
RBM39-237ENST00000492779 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
RBM39-237ENST00000492779 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
RBM39-237ENST00000492779 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
RBM39-237ENST00000492779 KRTAP12-4P60329 112 aa2□□□□□ -2.09
RBM39-237ENST00000492779 MT4P47944 62 aa1.96□□□□□ -2.1
RBM39-237ENST00000492779 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
RBM39-237ENST00000492779 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
RBM39-237ENST00000492779 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
RBM39-237ENST00000492779 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
RBM39-237ENST00000492779 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
RBM39-237ENST00000492779 MT1AP04731 61 aa1.85□□□□□ -2.11
RBM39-237ENST00000492779 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
RBM39-237ENST00000492779 PRM1P04553 51 aa1.8□□□□□ -2.12
RBM39-237ENST00000492779 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
RBM39-237ENST00000492779 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
RBM39-237ENST00000492779 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.13
RBM39-237ENST00000492779 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
RBM39-237ENST00000492779 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
RBM39-237ENST00000492779 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
RBM39-237ENST00000492779 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
RBM39-237ENST00000492779 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
RBM39-237ENST00000492779 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
RBM39-237ENST00000492779 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
RBM39-237ENST00000492779 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
RBM39-237ENST00000492779 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
RBM39-237ENST00000492779 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
RBM39-237ENST00000492779 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
RBM39-237ENST00000492779 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
RBM39-237ENST00000492779 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
RBM39-237ENST00000492779 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms