RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
PDLIM1-204ENST00000492511 C10orf95Q9H7T3 257 aa2.67□□□□□ -1.98
PDLIM1-204ENST00000492511 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.99
PDLIM1-204ENST00000492511 LCE5AQ5TCM9 118 aa2.65□□□□□ -1.99
PDLIM1-204ENST00000492511 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
PDLIM1-204ENST00000492511 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
PDLIM1-204ENST00000492511 UQCR11O14957 56 aa2.62□□□□□ -1.99
PDLIM1-204ENST00000492511 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
PDLIM1-204ENST00000492511 TNP1P09430 55 aa2.6□□□□□ -1.99
PDLIM1-204ENST00000492511 MT1GP13640 62 aa2.57□□□□□ -2
PDLIM1-204ENST00000492511 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
PDLIM1-204ENST00000492511 Q1T7F1 81 aa2.57□□□□□ -2
PDLIM1-204ENST00000492511 MT1LQ93083 61 aa2.57□□□□□ -2
PDLIM1-204ENST00000492511 PSPHP1O15172 72 aa2.56□□□□□ -2
PDLIM1-204ENST00000492511 MT1MQ8N339 61 aa2.54□□□□□ -2
PDLIM1-204ENST00000492511 V9GYY9 64 aa2.54□□□□□ -2
PDLIM1-204ENST00000492511 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
PDLIM1-204ENST00000492511 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
PDLIM1-204ENST00000492511 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
PDLIM1-204ENST00000492511 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
PDLIM1-204ENST00000492511 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
PDLIM1-204ENST00000492511 PCP4P48539 62 aa2.48□□□□□ -2.01
PDLIM1-204ENST00000492511 RPS28P62857 69 aaKnown RBP2.48□□□□□ -2.01
PDLIM1-204ENST00000492511 KRTAP25-1Q3LHN0 102 aa2.48□□□□□ -2.01
PDLIM1-204ENST00000492511 K7ERS5 55 aa2.46□□□□□ -2.02
PDLIM1-204ENST00000492511 MT4P47944 62 aa2.46□□□□□ -2.02
PDLIM1-204ENST00000492511 A6NED7 52 aa2.45□□□□□ -2.02
PDLIM1-204ENST00000492511 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
PDLIM1-204ENST00000492511 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
PDLIM1-204ENST00000492511 KRTAP23-1A1A580 65 aa2.41□□□□□ -2.02
PDLIM1-204ENST00000492511 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
PDLIM1-204ENST00000492511 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
PDLIM1-204ENST00000492511 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
PDLIM1-204ENST00000492511 ROMO1P60602 79 aa2.35□□□□□ -2.03
PDLIM1-204ENST00000492511 KRTAP15-1Q3LI76 137 aa2.35□□□□□ -2.03
PDLIM1-204ENST00000492511 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
PDLIM1-204ENST00000492511 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
PDLIM1-204ENST00000492511 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
PDLIM1-204ENST00000492511 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
PDLIM1-204ENST00000492511 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
PDLIM1-204ENST00000492511 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
PDLIM1-204ENST00000492511 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
PDLIM1-204ENST00000492511 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
PDLIM1-204ENST00000492511 MT1AP04731 61 aa2.17□□□□□ -2.06
PDLIM1-204ENST00000492511 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
PDLIM1-204ENST00000492511 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
PDLIM1-204ENST00000492511 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
PDLIM1-204ENST00000492511 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
PDLIM1-204ENST00000492511 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
PDLIM1-204ENST00000492511 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
PDLIM1-204ENST00000492511 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
PDLIM1-204ENST00000492511 PMAIP1Q13794 54 aa2.02□□□□□ -2.09
PDLIM1-204ENST00000492511 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
PDLIM1-204ENST00000492511 PRAC1Q96KF2 57 aa1.98□□□□□ -2.09
PDLIM1-204ENST00000492511 MT3P25713 68 aa1.97□□□□□ -2.09
PDLIM1-204ENST00000492511 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
PDLIM1-204ENST00000492511 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
PDLIM1-204ENST00000492511 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
PDLIM1-204ENST00000492511 KTN1-AS1Q86SY8 53 aa1.81□□□□□ -2.12
PDLIM1-204ENST00000492511 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
PDLIM1-204ENST00000492511 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
PDLIM1-204ENST00000492511 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
PDLIM1-204ENST00000492511 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
PDLIM1-204ENST00000492511 SVIPQ8NHG7 77 aa1.69□□□□□ -2.14
PDLIM1-204ENST00000492511 LCE3DQ9BYE3 92 aa1.67□□□□□ -2.14
PDLIM1-204ENST00000492511 LUZP6Q538Z0 58 aa1.59□□□□□ -2.15
PDLIM1-204ENST00000492511 LCE3EQ5T5B0 92 aa1.57□□□□□ -2.16
PDLIM1-204ENST00000492511 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
PDLIM1-204ENST00000492511 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
PDLIM1-204ENST00000492511 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
PDLIM1-204ENST00000492511 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
PDLIM1-204ENST00000492511 NDUFAF8A1L188 74 aa1.34□□□□□ -2.19
PDLIM1-204ENST00000492511 A0A0A0MQY5 61 aa1.29□□□□□ -2.2
PDLIM1-204ENST00000492511 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
PDLIM1-204ENST00000492511 PRM1P04553 51 aa1.22□□□□□ -2.21
PDLIM1-204ENST00000492511 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
PDLIM1-204ENST00000492511 INE1O15225 51 aa1.06□□□□□ -2.24
PDLIM1-204ENST00000492511 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 150.4 ms