RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 MT1GP13640 62 aa6.33□□□□□ -1.4
LMNB1-206ENST00000492190 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
LMNB1-206ENST00000492190 MT1LQ93083 61 aa6.33□□□□□ -1.4
LMNB1-206ENST00000492190 K7ERS5 55 aa6.28□□□□□ -1.4
LMNB1-206ENST00000492190 A6NED7 52 aa6.27□□□□□ -1.41
LMNB1-206ENST00000492190 MT1MQ8N339 61 aa6.27□□□□□ -1.41
LMNB1-206ENST00000492190 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
LMNB1-206ENST00000492190 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
LMNB1-206ENST00000492190 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
LMNB1-206ENST00000492190 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
LMNB1-206ENST00000492190 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
LMNB1-206ENST00000492190 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
LMNB1-206ENST00000492190 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
LMNB1-206ENST00000492190 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
LMNB1-206ENST00000492190 ROMO1P60602 79 aa5.96□□□□□ -1.46
LMNB1-206ENST00000492190 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
LMNB1-206ENST00000492190 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
LMNB1-206ENST00000492190 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
LMNB1-206ENST00000492190 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
LMNB1-206ENST00000492190 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.48
LMNB1-206ENST00000492190 MT4P47944 62 aa5.82□□□□□ -1.48
LMNB1-206ENST00000492190 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
LMNB1-206ENST00000492190 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
LMNB1-206ENST00000492190 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
LMNB1-206ENST00000492190 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-206ENST00000492190 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
LMNB1-206ENST00000492190 GPR98Q8WXG9 6306 aa5.67□□□□□ -1.5
LMNB1-206ENST00000492190 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
LMNB1-206ENST00000492190 BRK1Q8WUW1 75 aa5.57□□□□□ -1.52
LMNB1-206ENST00000492190 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
LMNB1-206ENST00000492190 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
LMNB1-206ENST00000492190 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
LMNB1-206ENST00000492190 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
LMNB1-206ENST00000492190 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
LMNB1-206ENST00000492190 MT1AP04731 61 aa5.38□□□□□ -1.55
LMNB1-206ENST00000492190 KRTAP6-1Q3LI64 71 aa5.37□□□□□ -1.55
LMNB1-206ENST00000492190 KRTAP5-10Q6L8G5 202 aa5.37□□□□□ -1.55
LMNB1-206ENST00000492190 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
LMNB1-206ENST00000492190 PMAIP1Q13794 54 aa5.23□□□□□ -1.57
LMNB1-206ENST00000492190 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
LMNB1-206ENST00000492190 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
LMNB1-206ENST00000492190 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
LMNB1-206ENST00000492190 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
LMNB1-206ENST00000492190 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
LMNB1-206ENST00000492190 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
LMNB1-206ENST00000492190 PRO0628Q9UI54 55 aa4.98□□□□□ -1.61
LMNB1-206ENST00000492190 MT3P25713 68 aa4.88□□□□□ -1.63
LMNB1-206ENST00000492190 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.63
LMNB1-206ENST00000492190 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
LMNB1-206ENST00000492190 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
LMNB1-206ENST00000492190 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
LMNB1-206ENST00000492190 MUC5ACP98088 5654 aa4.59□□□□□ -1.68
LMNB1-206ENST00000492190 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
LMNB1-206ENST00000492190 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
LMNB1-206ENST00000492190 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
LMNB1-206ENST00000492190 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
LMNB1-206ENST00000492190 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
LMNB1-206ENST00000492190 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
LMNB1-206ENST00000492190 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
LMNB1-206ENST00000492190 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
LMNB1-206ENST00000492190 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
LMNB1-206ENST00000492190 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
LMNB1-206ENST00000492190 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
LMNB1-206ENST00000492190 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
LMNB1-206ENST00000492190 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
LMNB1-206ENST00000492190 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
LMNB1-206ENST00000492190 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
LMNB1-206ENST00000492190 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
LMNB1-206ENST00000492190 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
LMNB1-206ENST00000492190 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
LMNB1-206ENST00000492190 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
LMNB1-206ENST00000492190 PRM1P04553 51 aa3.08□□□□□ -1.92
LMNB1-206ENST00000492190 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
LMNB1-206ENST00000492190 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
LMNB1-206ENST00000492190 H3BS24 57 aa2.96□□□□□ -1.94
LMNB1-206ENST00000492190 INE1O15225 51 aa2.82□□□□□ -1.96
LMNB1-206ENST00000492190 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
LMNB1-206ENST00000492190 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms